Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma17g01992 | ATGCTCTCTACTATGACATTTGTCATGGCTGCTATTTTCAGGATGGAGAAGTTAAACGTGAGAAAAGTAAGATGCCAACCAAAGGTGATTGGAACTGTAGTAACAGTTGTTGGGGCCATGTTGATGACATTGTACAAAGGGCAAGTAATCAGTTTCTTCGGGTCTAAGTACATGCATCACCCAACAAACTATGTACCTGAAAACAACACTGATTCTGGTGAAAAGGATTGGTTCAAGGGTTCTGTTCTTCTCGTACTTGCCACCCTTTCATGGGCTTCTTCATCCTTCAGGCAAGCAGTGACATTAAGGAAATACACTGTTCAGCTCTCCCTCACAGCACTTGTGTGTGCCTTAGGTATCACCTACTATGTTCAAGGGATTGTCATGCAGAAAAAAGGGCCTGTTTTCGTTACTGCTTTCAGCCCTTTGATGATGATTATCGTAGCCATCATGGGTGCCTTCATCCTTGCAGAAAAAATATATCTTGGAGG | 491 | 0.4277 | MLSTMTFVMAAIFRMEKLNVRKVRCQPKVIGTVVTVVGAMLMTLYKGQVISFFGSKYMHHPTNYVPENNTDSGEKDWFKGSVLLVLATLSWASSSFRQAVTLRKYTVQLSLTALVCALGITYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMGAFILAEKIYLG | 163 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma17g01992 | 163 | PANTHER | WAT1-RELATED PROTEIN | 119 | 163 | - | - | |
| Gma17g01992 | 163 | PANTHER | WAT1-RELATED PROTEIN | 1 | 119 | - | - | |
| Gma17g01992 | 163 | PANTHER | WAT1-RELATED PROTEIN | 1 | 119 | IPR030184 | GO:0016021|GO:0022857 | |
| Gma17g01992 | 163 | PANTHER | WAT1-RELATED PROTEIN | 119 | 163 | IPR030184 | GO:0016021|GO:0022857 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma17g01992 | Gma-Chr17 | 35656080 | 35657077 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gma17g01992 | 1 | 163 | Nodulin-like Gene Family | AT5G07050 | 46.377 | 8.87e-51 | 165 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma17g01992 | - | - | gmx:100811617 | 274.248 |