Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01987 ATGGATTCTCAAATACTCAACTCATTAGCCCTTATCTTGCCCTTTTTCCTCTTCATGATTGTGGTGCTGAAACTAGGGAGAAAACTCAAGAAAACTGAGCCATCTCTGAACATACCCCCAGGACCATGGAAACTGCCTATTGTAGGAAACTTACACCAACTTGTTACATCTTCACCACATAAAAAATTCAGAGACTTGGCCAAAATATATGGACCCATGATGCATCTTCAACTTGGGGAGATCTTCACAATCGTTGTTTCCTCGGCAGAGTATGCTAAGGAGATACTGAAAACCCATGATGTCATCTTTGCATCAAGGCCTCACTTTCTAGTTTCAGAAATAATGTCCTATGAAAGCACAAACATTGCTTTTTCACCTTATGGAAATTATTGGAGGCAGGTACGTAAAATATGCACCTTGGAGCTTCTCTCCCAAAAACGTGTCAACTCATTCCAGCCAATTAGAGAAGAAGAGCTCACCAATCTTGTTAAAATGATTGGTTCACAAGAAGGGTCTTCCATCAACCTCACAGAAGCAGTGCACTCATCAATGTATCATATCATTACAAGAGCTGCGTTTGGCATAAGGTGCAAAGACCAAGATGAATTCATATCAGCGATAAAGCAAGCTGTGCTAGTTGCAGCAGGTTTCAACATAGGAGATTTGTTTCCTTCTGCTAAATGGCTTCAACTTGTTACTGGTTTGAGGCCTACCCTTGAGGCGCTTTTTCAACGAACTGATCAGATACTAGAAGACATCATCAATGAACACAGAGAGGCAAAGTCAAAAGCCAAAGAAGGCCATGGTGAAGCAGAGGAAGAAGGTTTGTTAGATGTTCTCCTAAAATTCGAGGATGGTAATGATAGTAACCAGAGCATTTGCTTAACTATTAACAATATCAAGGCAGTAATCGCGGACATCTTCGGTGGTGGAGTAGAGCCAATAGCTACTACCATAAATTGGGCAATGGCAGAGATGATAAGGAATCCAAGAGTGATGAAGACAGCACAGGTTGAGGTGAGAGAGGTATTCAATATTAAAGGAAGGGTTGATGAAACTTGCATCAATGAACTCAAATATTTGAAATCTGTTGTCAAAGAGACCCTAAGGTTGCACCCACCAGCTCCTCTTATACTTCCTAGAGAATGTCAAGAGACGTGTAAGATTAATGGGTATGACATACCAGTAAAAACCAAGGTATTCATTAATGCTTGGGCAATTGGAAGAGATCCAAACTACTGGAGTGAACCAGAGAGGTTTTATCCAGAGAGATTCATTGACAGCTCTGTTGATTACAAAGGGGGTAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGTCCCGGCATCACCTTTGGTTTAGTAAATGTTGAACTAACTCTTGCGTTTTTGTTGTATCACTTGGATTGGAAGCTTCCTAATGGAATGAAAAATGAGGACTTTGACATGACTGAGAAATTTGGAGTGACTGTTGCAAGAAAAGATGACATATACTTGATACCTGCTACTTCTCGTCCTTTCCTGGGAAATGGTGCAGAAAGCATGGAAGCAGTGCAGTCAAAGAAGGTTGAGTAG 1581 0.408 MDSQILNSLALILPFFLFMIVVLKLGRKLKKTEPSLNIPPGPWKLPIVGNLHQLVTSSPHKKFRDLAKIYGPMMHLQLGEIFTIVVSSAEYAKEILKTHDVIFASRPHFLVSEIMSYESTNIAFSPYGNYWRQVRKICTLELLSQKRVNSFQPIREEELTNLVKMIGSQEGSSINLTEAVHSSMYHIITRAAFGIRCKDQDEFISAIKQAVLVAAGFNIGDLFPSAKWLQLVTGLRPTLEALFQRTDQILEDIINEHREAKSKAKEGHGEAEEEGLLDVLLKFEDGNDSNQSICLTINNIKAVIADIFGGGVEPIATTINWAMAEMIRNPRVMKTAQVEVREVFNIKGRVDETCINELKYLKSVVKETLRLHPPAPLILPRECQETCKINGYDIPVKTKVFINAWAIGRDPNYWSEPERFYPERFIDSSVDYKGGNFEYIPFGAGRRICPGITFGLVNVELTLAFLLYHLDWKLPNGMKNEDFDMTEKFGVTVARKDDIYLIPATSRPFLGNGAESMEAVQSKKVE 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01987 526 Coils Coil 254 274 - -
Gma17g01987 526 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 10 506 - -
Gma17g01987 526 SUPERFAMILY Cytochrome P450 39 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma17g01987 526 PANTHER CYTOCHROME P450 71B11-RELATED 10 506 - -
Gma17g01987 526 Pfam Cytochrome P450 39 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma17g01987 526 Gene3D Cytochrome P450 31 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma17g01987 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Gma17g01987 526 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma17g01987 526 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma17g01987 526 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma17g01987 526 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma17g01987 526 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma17g01987 526 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma17g01987 526 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma17g01987 526 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma17g01987 526 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma17g01987 526 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma17g01987 526 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma17g01987 526 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01987 Gma-Chr17 35548092 35550817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01987 39 503 Cytochrome P450 AT3G26330 43.008 2.47e-133 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01987 - - gmx:100818508 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01987 17 35548092 35550817 Gma14g01103 14 15160945 15163353 GST