Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01985 ATGAAAGAAAATGTTCTTCCACTCATGACTGTAAATTTCCAGCAAGGACTTGGCCAGAAGTTTAAACAGCCAGCTGGAACTGGTATTGATTTTTCAACATTTGAGGAGTCTGAGTTATTGAAAGTAGGGGACATGGATGTCTATCCTGTTGCAATTAAAGCAGATGCATCCTCCAGCGACCATGATGAATCAAAATCAAATGAAACTCCATCATCCGAACTGAGGTCCTTGATATTGACATTTCTTCAGCTGTTGGTCTATGCAAGGAAGAGGAAAACATTTGTTCTAGTTAATTCTGGTTTAGTGTATGGCTTTGGCTTCATAGGATTTGGCATCCTCGGATTCCTGGATAGAAAGGTATCTGATAAAGTATTGAAACCTAGAATCTTAGATACCTTGAGAGCTCACCATGTTTGCCAAATTAGCACTGGCTTGTACCACACTGTGGTGATCACTAGCAGGGGACAAATATTTGGCTTTGGAGACAATGAAAGAGCACAACTTGATCATGACACTTCACCAAACATGTAA 531 0.4011 MKENVLPLMTVNFQQGLGQKFKQPAGTGIDFSTFEESELLKVGDMDVYPVAIKADASSSDHDESKSNETPSSELRSLILTFLQLLVYARKRKTFVLVNSGLVYGFGFIGFGILGFLDRKVSDKVLKPRILDTLRAHHVCQISTGLYHTVVITSRGQIFGFGDNERAQLDHDTSPNM 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01985 176 Gene3D - 40 176 IPR009091 -
Gma17g01985 176 PANTHER BNAA01G28890D PROTEIN 82 172 - -
Gma17g01985 176 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 100 154 IPR000408 -
Gma17g01985 176 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 82 172 - -
Gma17g01985 176 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 141 151 IPR000408 -
Gma17g01985 176 SUPERFAMILY RCC1/BLIP-II 86 174 IPR009091 -
Gma17g01985 176 Pfam Regulator of chromosome condensation (RCC1) repeat 138 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01985 Gma-Chr17 35510989 35513467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01985 2 106 C3H Transcription Factor Family AT3G09770 36.283 2.49e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01985 - - gmx:100786672 155.221