Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01976 ATGCAGATATTTAGCTTTCCAATCATTGTTGCTACAATAGGTAACTTTTCAGTTGCAAACAAGTTAGGACAGGGTGGTTTTGGACCAGTTTACAAGCTAATGAGTGTACATTCTCAGGGGGTACTTCCTGATGGACAAGAAATAGCAATAAAGATACTTTCTAGTAGATCGGGGCAAGGGTTGGTGGAGTTTAAGAACGAGGCTCAACTTGTAGCAAAATTGCAGCATACTAATTTTGTAAAGCTTTTGGGGCTCTGCATACAAAATGAAGAAAACATATTAATCTATGAGTACTTGCCCAACAAAATTTTAGACTTTCATCTCTTTGGCTCTGAATTTTCTGAAGAAAATTTTATTGCCAAAGTTAAAATGGAAATAGTAGTGAGAAAGGACCAGGTCGTGGAAGACGGATATGAATTCTTTGTTAACATGCAACTTGTACACATCTTCTCGGTACCTAAGTATTGTGGAGAGTTTGACAATGTTGGTGCTGTGATGATTGTTGATGAGACACTTGTGTGCTTTTTTCAAATATTGAAGCCTGTATAA 549 0.3698 MQIFSFPIIVATIGNFSVANKLGQGGFGPVYKLMSVHSQGVLPDGQEIAIKILSSRSGQGLVEFKNEAQLVAKLQHTNFVKLLGLCIQNEENILIYEYLPNKILDFHLFGSEFSEENFIAKVKMEIVVRKDQVVEDGYEFFVNMQLVHIFSVPKYCGEFDNVGAVMIVDETLVCFFQILKPV 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01976 182 Pfam Protein tyrosine and serine/threonine kinase 18 148 IPR001245 GO:0004672|GO:0006468
Gma17g01976 182 PANTHER OS01G0783800 PROTEIN 2 112 - -
Gma17g01976 182 SUPERFAMILY Metallo-dependent phosphatases 112 182 IPR029052 -
Gma17g01976 182 PRINTS Serine/threonine phosphatase family signature 145 161 IPR006186 GO:0016787
Gma17g01976 182 PRINTS Serine/threonine phosphatase family signature 123 143 IPR006186 GO:0016787
Gma17g01976 182 Gene3D Phosphorylase Kinase; domain 1 1 97 - -
Gma17g01976 182 ProSiteProfiles Protein kinase domain profile. 16 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01976 182 Gene3D - 98 181 IPR029052 -
Gma17g01976 182 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 112 - -
Gma17g01976 182 SUPERFAMILY Protein kinase-like (PK-like) 2 118 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01976 Gma-Chr17 35303523 35306295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01976 4 116 Receptor kinase-like Gene Family AT4G23130 53.982 1.18e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma17g01976 PK_Tyr_Ser-Thr 2.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01976 - - gmx:100811504 182.956