Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01970 ATGGGACCTTTTGGAGGAATAATTCAAGATGTCAAAGGAAGGGTTGAATGTTATAAACATGATTGGGCTAGTGCAATCTGTTCTGGCATTAGGATATTGGCTCCAACTTTCTACATATTTTTTGCGTCTGCTCTTCCTGTTATTGCTTTTGGAGAGCAACTTAACAGGGATACAGGCGGAAGCTTGAGCACATTGGAAACTTTGGCATCAACTGCCATTTGTGGAATAATCCACTCAATATTTGGTGGTCAACCTTTGTTGATTTTGGGAGTTGCTGAACCAACTGTTATAATGTACACTATTCTTTATGAGTTTTGCACAAAAACGCCAGAGTTAGGTGCCAAGATGTTTCTGCCGTGGGCTGGTTGGGTTTGTGTGTGGACATCATTCCTGCTGATTATTCTTGCAATTTTCAACGCATGCACAATCATCACAAGGTTCACAAGAATTGCAGAGGAATTATTTGGCATGTTGATTACTGTCCTTTTCTTTCAAGAGGCTATAAAGGGAATCATAGGTGAGTTCAACACCCCTAAGGATGGAAATCTTTTGTTAGAGGAAAATCAATTCCATTGGCGGTATGCAAATGGACTACTTGCAATCATTTTATCTTTTGGACTACTTATCACTGCCACGATGAGCAGAAAAGCAAGAACATGGAAATATGGATCAGGGTGGCTACGAGGTTTCATTGCAGATTATGGGGTTCCAATGATGTTAGTGATTTGGACTGGACTATCTTATACTCTACCAGGAAAAATTCCATCTGCAGTTCCTAGAAGGCTAGTTTGTCCACTTCCATGGGAATCTACTTACCACTGGACAGTAGTAAAGGATATGGGGAAGGTACCCTTGGGATATATCTTTGGGGCATTTATTCCAGCTGTGATGATAGCAGGTTTATACTTTTTTGATCATAGTGTAGCTTCTAAGATGGCTCAACAGAAGGAATTTAATCTTCAAAAACCATCTGCCTACCACTATGATATTTTACTACTTGGTATAATGACTCTGATTTGCGGTATCCTTGGCCTTCCTCCATCAAATGGAGTTCTTCCTCAATCCCCCATGCATACAAAGAGTTTGACAGTTCTTAGGAAGCAGTTGATCCGAAAGAAGGTGGTAAAAAGTGTCAAGCAACAAGGAAGCAACTCTGAATTATATGGAAAGATGCAAGTTGTGTTTGTAGAAATGGATACAACACCAACAACAAAAGAGTTGGAGAATTTGAAGGAGGCTGTAATGAAATCTAATGAAAAGAATGCTGCAAAGGAAAATTTTGATCCTGATAAACATATAGATGCCTATCTACCTGTACGAGTTAATGAGCAAAGAATGAGCAACTTATTACAGTCTCTTTTGATTGGCCTATCAATTTTTTCCGTTAATATCATCAAAATGATACCCACTTCAGTTCTATGGGGATATTTTGCATACATGGCAATTGATAGTCTCCCAGGGAATCAATTTTGGGAAAGGATATCGCTTCTGTTCATCCCACCAAGTCGACGCTATAAGATATTGGAAGGTTATCATGCCTCGTTTGTGGAGTCAGTACCATTCAAGACCATAGCTGTATTCACAATATTACAGTTTGTGTATTTCCTAATCTGTTTTGGAGTGACATGGATACCTGTAGGAGGAATACTTTTTCCATTACCATTTTTCCTTCTCATAACTATAAGAGAGCATTTGCTTCCAAAGATATTCAAACCTAATCATCTTCAAGAACTAGATGCATCTGGGTACGAGGAAATTGTTGGTGCTCCACATATTACACATAATATACCACCAAGGGAAAAAGAGTCAAATGACCCTGACAGTGATGATATGAGCTCAGAAGATTATTATGATGCAGAGATATTGGATAAGATGACCACAAATAGGGGAGAATTGAAGCTTAGAACTGTAAGCCGAAATAATAGTAAAAGCTTCAGCTACAGCTCCAGTGAAGACATGCAACATTAG 1968 0.3892 MGPFGGIIQDVKGRVECYKHDWASAICSGIRILAPTFYIFFASALPVIAFGEQLNRDTGGSLSTLETLASTAICGIIHSIFGGQPLLILGVAEPTVIMYTILYEFCTKTPELGAKMFLPWAGWVCVWTSFLLIILAIFNACTIITRFTRIAEELFGMLITVLFFQEAIKGIIGEFNTPKDGNLLLEENQFHWRYANGLLAIILSFGLLITATMSRKARTWKYGSGWLRGFIADYGVPMMLVIWTGLSYTLPGKIPSAVPRRLVCPLPWESTYHWTVVKDMGKVPLGYIFGAFIPAVMIAGLYFFDHSVASKMAQQKEFNLQKPSAYHYDILLLGIMTLICGILGLPPSNGVLPQSPMHTKSLTVLRKQLIRKKVVKSVKQQGSNSELYGKMQVVFVEMDTTPTTKELENLKEAVMKSNEKNAAKENFDPDKHIDAYLPVRVNEQRMSNLLQSLLIGLSIFSVNIIKMIPTSVLWGYFAYMAIDSLPGNQFWERISLLFIPPSRRYKILEGYHASFVESVPFKTIAVFTILQFVYFLICFGVTWIPVGGILFPLPFFLLITIREHLLPKIFKPNHLQELDASGYEEIVGAPHITHNIPPREKESNDPDSDDMSSEDYYDAEILDKMTTNRGELKLRTVSRNNSKSFSYSSSEDMQH 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01970 655 PANTHER ANION EXCHANGE PROTEIN 2 650 IPR003020 GO:0005452|GO:0006820|GO:0016020
Gma17g01970 655 Gene3D Helical hairpin bin 14 56 - -
Gma17g01970 655 Pfam HCO3- transporter family 439 529 IPR011531 GO:0006820|GO:0016021
Gma17g01970 655 Pfam HCO3- transporter family 185 368 IPR011531 GO:0006820|GO:0016021
Gma17g01970 655 Pfam HCO3- transporter family 3 176 IPR011531 GO:0006820|GO:0016021
Gma17g01970 655 PANTHER BORON TRANSPORTER 6-RELATED 2 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01970 Gma-Chr17 35194088 35209969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01970 2 638 Antiporters AT5G25430 66.512 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01970 K24194 - gmx:100808880 1281.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01970 17 35194088 35209969 Gma17g01970 17 35194088 35209969 ECH
Gma17g01970 17 35194088 35209969 Gma06g00631 06 5701817 5705621 PCT
Gma06g00631 06 5701817 5705621 Gma17g01970 17 35194088 35209969 PCT