Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01957 ATGCCACAACAAAATGATGTTATGACAAGCCTCAGTGCCACAACAAAACCTACAGAAGTTCAATCACCATCAGTTACAAAGGCTGTTCTGCCTACAGGAATAGCAGTTTTGGTCAAGAAGATTGAGTGGGAAGAGAGGAGCAGCAAGGTTGCGTCAGAATTTATAATAAGACTGGGAAATGCAAGGCACAAGAATTTAGTCAGATTGTTGGGGTTTTGCCACAACCCGCATCTATTCTATCTTTTGTATGATTACTTGCCTAATGGGAACTTGGCTGAGAAAATGGAAATGAAATGGGATTGGGCTGCAAAATTCAGAACAGTAGTTGGAATTGCTAGAGGACTTTGCTTCCTTCACCATGAATGTTACCCAACTATACCTCATGGTGACAAAAAGGCCAGCAACATTGTATTTGATGAAAATATGGAACCCCATTTGGTAGAATTTGGGTTCAAGCAAGTATTGAGGTGGAGCAAAGGCTCATCACCCACCACAAATAAGTGGGAAACAGGCTAG 516 0.4167 MPQQNDVMTSLSATTKPTEVQSPSVTKAVLPTGIAVLVKKIEWEERSSKVASEFIIRLGNARHKNLVRLLGFCHNPHLFYLLYDYLPNGNLAEKMEMKWDWAAKFRTVVGIARGLCFLHHECYPTIPHGDKKASNIVFDENMEPHLVEFGFKQVLRWSKGSSPTTNKWETG 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01957 171 Gene3D Transferase(Phosphotransferase) domain 1 9 170 - -
Gma17g01957 171 PANTHER UNNAMED PRODUCT 4 168 - -
Gma17g01957 171 ProSiteProfiles Protein kinase domain profile. 1 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01957 171 Pfam Protein kinase domain 24 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01957 171 SUPERFAMILY Protein kinase-like (PK-like) 24 160 IPR011009 -
Gma17g01957 171 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 4 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01957 Gma-Chr17 34954923 34955934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01957 5 155 Receptor kinase-like Gene Family AT5G51350 55.484 4.75e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma17g01957 Pkinase 5.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01957 - - gsj:114391671 359.377