Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma17g01956 | ATGGAGAGCAGTGACATATCCAGAGTTGATAGTGCAAGAGCCAGTGGCTCTAACATATGGAGGAACAACAGCATGGATGTTTTCTCAACATCTGAACGCGAAGATGACGAAGAGGCTCTCAAATGGGCAGCCATAGAGAGACTCCCGACATATCTTCGAATTCGGAGAAGCATACTCAACAATGAAGATGGGAAAGGTAGAGAGGTTGACATCAAGCAACTGGGCCTCACAGAGAGAAAGATTATTGTGGAGAGGCTTGTGAAGATAGCAGAAGAAGATAATGAAAGGTTCTTGCTGAAACTCAGGGAAAGAATGGACAGAGTTGGGCTTGATATTCCGACAATTGAAGTTAGATTTGAGCATATAAATGTGGAAGCACAAGTTTATGTTGGAGGAAGAGCACTGCCTTCAATGCTGAACTTTTTTGCTAATGTAATTGAGGGGTTCTTAAATTATCTTCACATAATTCCAAGTCCAAAGAAACCGTTGCGTATACTTCAGAATGTTAGTGGAATCATAAAGCCTCGAAGAATGACATTGCTTTTGGGGCCACCAGGTTCTGGAAAGACCACTTTGCTGTTAGCGTTGGCTGGAAAACTTGATAAAGATTTGAATCATTCAGGGAGAGTAACATACAATGGGCATGGGCTTGAAGAGTTTGTGCCACAAAGGACTTCAGCTTATATAAGTCAATATGATAACCACATTGGAGAAATGACTGTGAGAGAAACTCTGGCTTTCTCAGCTAGATGCCAAGGGGTTGGACAGAACTATGAGATGTTGGCTGAGCTACTAAGAAGAGAGAAGCATGCAAAGATTAAACCGGATCCTGATATTGATGCCTATATGAAGGCTGCAGCACTAGGAAGACAACGGACGAGCGTGGTCACTGATTATATTCTCAAGATTTTGGGACTTGAAGTGTGTGCTGACATTATGGTAGGAGATGGAATGATAAGAGGTATCTCAGGAGGGCAGAAAAAGAGAGTCACAACAGGGGAGATGCTGGTTGGACCTATAAAGGTGTTATTCATGGACGAAATATCAACTGGTTTGGACAGTTCCACAACTTTTCAAATAATCAATTCTATCCGGCAATCCATCCATATTCTGAATGGAACTGCACTTGTGTCTCTGCTACAGCCAGCACCAGAAACTTATGAACTTTTTGATGATATAATACTATTAACGGATGGACAAATCGTGTACCAAGGACCAAGAGAAAATGTGGTAGAGTTTTTCGAATCAATGGGTTTTAAGTGTCCTGAAAGAAAAGGAGTTGCTGACTTCTTGCAAGAAGTGACATCAATAAAGGATCAATGGCAATATTGGGCACGTAAAGATGAACCTTATAGCTTTGTCACTGTCAAGGAATTTACTGAAGCATTCCAGCTATTTCACATAGGTCAAAATCTTGGAGAGGAGCTAGCCTGTCCATTTGACAAGTCTAAATGCCATCCAAATGTATTGACCACAAAGAAGTATGGTGTTAACAAAAAGGAGCTGCTGAGGGCTTGTGCCAGCAGGGAATTTTTGCTTATGAAGAGAAATTCATTTGTCTACATATTCAAAGTCACACAACTCATTTATTTAGCTGTCATGACAACAACATTATTTCTACGAACTAAGATGCATCGCAATACGGTGGAGGATGGAGGAACTTACATGGGTGCCCTTTTCTTTGCTGTCACCGTTGCGATGTTCAATGGCATATCAGAGCTAAATATGGCCATCATGAAACTTCCTGTCTTTTACAAGCAAAGGGACCTTCTTTTCTATCCTGCATGGGCTTATTCTCTTCCCCCATGGATTCTCAAAATACCAATTGCCCTCATAGAAGTAGCTATTTGGGAAGGCATCTCTTACTATGCCATTGGCTTTGATCCTAATTTTTACCTGATAATCCTGTGCATTAACCAGATGGCATCTTCGCTATTTCGGTTGATGGCAGCATTCGGAAGGGATGTTATAGTTGCAAATACTGTTGGAAGTTTTGCATTACTTATAGTTCTGGTTTTGGGAGGATTTGTGATTTCGCGAGAGAATGTGCACAAATGGTTTGTGTGGGGTTACTGGTCCTCACCACTGATGTATGGACAGAATGCTATAGCTGTGAATGAATTTCTTGGTCATAGTTGGAGAAAGGTTACTCCTAATTCCAATGAAACACTAGGAGTTTTGATACTGAAAACTCGTGGATTTTTCCCAGAAGCTTATTGGTATTGGATTGGAGTAGGAGCATTAATTGGTTATGTATTTTTGTATAATTTCCTGTTTACCTTGGCTTTGCAATATCTAAGTCCATTCAGAAAGGATCAAGCAGGGCTATCCCAAGAGAAATTGATTGAGAGAAATGCTTCAACAGCTGAAGAGTTGATTCAATTACCAAATGGAAAAATCTCTTCTGAAACAAAGATTGTAGAAGAAGCAAACTTACCATCCAGATCTTTTTCTGGAAGACTTAGTGATGATAAAGCTAACAGAAGTGGAAGGAAGGGTATGGTTCTTCCTTTTCAACCTCTATCTCTCACATTTGATGAGATAAAATATTCTGTAGACATGCCACAGGAAATGAAAAAGCAAGGAGTTTTTGAGGAACGTCTAGAACTTTTGAAGGGTGTTAGTGGTGTCTTTAGGCCAGGAGTACTAACAGCTCTGATGGGCGTAAGTGGTGCCGGTAAGACTACATTAATGGATGTTTTAGCTGGAAGGAAAACTGGTGGATATATTGAAGGAGGTATCACAATATCTGGGTACCCAAAGAGGCAAGAAACATTTGCTCGCATCTCAGGATATTGTGAACAATTTGATATCCACTCACCTAATGTTACAGTTTATGAATCTTTATTATATTCTGCATGGCTTCGGTTACCCCGTGAAGTTGATCACGCAACTAGAAAGATGTTCATTGAGGAAGTTATGGAGCTAGTAGAGCTTAATTCAATAAGAGAAGCGCTTGTTGGATTGCCAGGAGAGAATGGACTTTCAACCGAGCAGCGCAAGAGGCTTACAATTGCTGTTGAACTAGTAGCCAACCCATCAATAATATTCATGGATGAGCCAACCTCTGGCCTTGATGCTAGAGCAGCTGCAATTGTAATGAGAACCGTGAGGAATACCGTGAACACGGGACGAACTGTGGTTTGCACCATCCACCAGCCAAGTATTGATATATTTGATGCCTTTGATGAGCTGTTACTTTTGAAGTTGGGAGGGGAGCAAATATATGCTGGTCCATTAGGCCACCACTGTTCCGATCTGATTCAGTACTTTGAGGCTATTCAAGGAGTTCCTAAGATCAAAGAAGGTTATAATCCTGCAACCTGGATGTTGGAAGTTACATCAGCAGGCACAGAAGCATCTCTTAAGGTCAACTTCACCAATGTGTACAGAAACTCAGAACTATACCGGAGAAACAAGCAATTGATCAAAGAGCTTAGTATACCTCCTGAAGGTTCAAGGGATCTACACTTTGATAGTCAGTATTCACAGACTTTGGTGACACAATGTAAAGTTTGTCTATGGAAACAGCATTTATCATACTGGAGAAACACATCATATACAGCAGTTAGACTCCTATTTACAATGCTAATAGCATTATTATTTGGGATCATATTTTGGGACATTGGCCTGAAAAGGAGAAAAGAGCAAGATCTTTTCAATGCTATGGGTTCAATGTATGCTGCAGTTACCTTCATCGGAGTACAAAATGGTGCCTCGGTGCAGCCTATAATAGCGGTAGAGAGAACCGTCTTCTACAGAGAGAGAGCTGCTGGAATGTATTCAGCTTTGCCATATGCACTTGCACAGGTTATTATTGAACTTCCCCACATCTTGGTTCAGACCCTGATGTACGGAATTATAGTATATGCCATGATGGGATTCGATTGGACCACATCAAAGTTCTTGTGGTATCTTTTCTTCATGTACTTCACTTTCTTATACTTCACCTTCTATGGTATGATGACCCTAGCCATTACCCCCAACGCACACGTTGCTGCCATATTGTCCAGTGCATTCTATGCAATATGGAGCCTTTTCTCAGGCTTCATTATTCCCTTATCTAGAATACCCATATGGTGGAAGTGGTACTATTGGATCTGCCCTGTTGCATGGACCTTGAACGGATTGGTGGCTTCGCAATATGGAGACAACAGGGACAAACTTGAGAATGGTCAAAGGGTTGAAGAATTTGTGAAGAGTTATTTTGGGTTTGAACATGAATTTCTTGGGGTAGTTGCAATTGTGGTGGCCGGTTTCTCAGTGTTGTTTGCACTTATCTTCGCCTTTGGAATCAAAGTATTCAACTTCCAAAAACGATGA | 4323 | 0.4101 | MESSDISRVDSARASGSNIWRNNSMDVFSTSEREDDEEALKWAAIERLPTYLRIRRSILNNEDGKGREVDIKQLGLTERKIIVERLVKIAEEDNERFLLKLRERMDRVGLDIPTIEVRFEHINVEAQVYVGGRALPSMLNFFANVIEGFLNYLHIIPSPKKPLRILQNVSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLDKDLNHSGRVTYNGHGLEEFVPQRTSAYISQYDNHIGEMTVRETLAFSARCQGVGQNYEMLAELLRREKHAKIKPDPDIDAYMKAAALGRQRTSVVTDYILKILGLEVCADIMVGDGMIRGISGGQKKRVTTGEMLVGPIKVLFMDEISTGLDSSTTFQIINSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPRENVVEFFESMGFKCPERKGVADFLQEVTSIKDQWQYWARKDEPYSFVTVKEFTEAFQLFHIGQNLGEELACPFDKSKCHPNVLTTKKYGVNKKELLRACASREFLLMKRNSFVYIFKVTQLIYLAVMTTTLFLRTKMHRNTVEDGGTYMGALFFAVTVAMFNGISELNMAIMKLPVFYKQRDLLFYPAWAYSLPPWILKIPIALIEVAIWEGISYYAIGFDPNFYLIILCINQMASSLFRLMAAFGRDVIVANTVGSFALLIVLVLGGFVISRENVHKWFVWGYWSSPLMYGQNAIAVNEFLGHSWRKVTPNSNETLGVLILKTRGFFPEAYWYWIGVGALIGYVFLYNFLFTLALQYLSPFRKDQAGLSQEKLIERNASTAEELIQLPNGKISSETKIVEEANLPSRSFSGRLSDDKANRSGRKGMVLPFQPLSLTFDEIKYSVDMPQEMKKQGVFEERLELLKGVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGGITISGYPKRQETFARISGYCEQFDIHSPNVTVYESLLYSAWLRLPREVDHATRKMFIEEVMELVELNSIREALVGLPGENGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYAGPLGHHCSDLIQYFEAIQGVPKIKEGYNPATWMLEVTSAGTEASLKVNFTNVYRNSELYRRNKQLIKELSIPPEGSRDLHFDSQYSQTLVTQCKVCLWKQHLSYWRNTSYTAVRLLFTMLIALLFGIIFWDIGLKRRKEQDLFNAMGSMYAAVTFIGVQNGASVQPIIAVERTVFYRERAAGMYSALPYALAQVIIELPHILVQTLMYGIIVYAMMGFDWTTSKFLWYLFFMYFTFLYFTFYGMMTLAITPNAHVAAILSSAFYAIWSLFSGFIIPLSRIPIWWKWYYWICPVAWTLNGLVASQYGDNRDKLENGQRVEEFVKSYFGFEHEFLGVVAIVVAGFSVLFALIFAFGIKVFNFQKR | 1440 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma17g01956 | 1440 | CDD | ABCG_PDR_domain2 | 840 | 1078 | IPR034003 | - | |
Gma17g01956 | 1440 | Pfam | ABC-transporter N-terminal | 90 | 141 | IPR029481 | - | |
Gma17g01956 | 1440 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 163 | 423 | IPR027417 | - | |
Gma17g01956 | 1440 | PANTHER | ATP-BINDING CASSETTE TRANSPORTER | 9 | 1440 | - | - | |
Gma17g01956 | 1440 | PANTHER | ABC-2 AND PLANT PDR ABC-TYPE TRANSPORTER FAMILY PROTEIN | 9 | 1440 | - | - | |
Gma17g01956 | 1440 | Pfam | ABC transporter | 166 | 348 | IPR003439 | GO:0005524 | |
Gma17g01956 | 1440 | Gene3D | - | 857 | 1093 | IPR027417 | - | |
Gma17g01956 | 1440 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 150 | 423 | IPR003439 | GO:0005524 | |
Gma17g01956 | 1440 | Pfam | Plant PDR ABC transporter associated | 713 | 774 | IPR013581 | - | |
Gma17g01956 | 1440 | Gene3D | - | 153 | 456 | IPR027417 | - | |
Gma17g01956 | 1440 | Pfam | ABC-2 type transporter | 502 | 708 | IPR013525 | GO:0016020|GO:0140359 | |
Gma17g01956 | 1440 | Pfam | ABC-2 type transporter | 1168 | 1382 | IPR013525 | GO:0016020|GO:0140359 | |
Gma17g01956 | 1440 | CDD | ABCG_PDR_domain1 | 146 | 405 | IPR034001 | - | |
Gma17g01956 | 1440 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 867 | 1081 | IPR027417 | - | |
Gma17g01956 | 1440 | SMART | AAA_5 | 175 | 400 | IPR003593 | - | |
Gma17g01956 | 1440 | SMART | AAA_5 | 880 | 1072 | IPR003593 | - | |
Gma17g01956 | 1440 | Pfam | ABC transporter | 871 | 1023 | IPR003439 | GO:0005524 | |
Gma17g01956 | 1440 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 843 | 1095 | IPR003439 | GO:0005524 | |
Gma17g01956 | 1440 | Pfam | ABC-2 type transporter | 381 | 432 | IPR043926 | GO:0140359 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma17g01956 | Gma-Chr17 | 34918304 | 34926620 | Dispersed/Proximal |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma17g01956 | K08711 | - | gmx:100810505 | 2813.1 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma17g01956 | 17 | 34918304 | 34926620 | Gma17g01956 | 17 | 34918304 | 34926620 | ECH | |
Gma17g01956 | 17 | 34918304 | 34926620 | Gma14g01132 | 14 | 16765843 | 16774603 | GST | |
Gma04g00643 | 04 | 5915348 | 5922812 | Gma17g01956 | 17 | 34918304 | 34926620 | PCT | |
Gma06g00636 | 06 | 5739270 | 5746855 | Gma17g01956 | 17 | 34918304 | 34926620 | PCT |