Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01956 ATGGAGAGCAGTGACATATCCAGAGTTGATAGTGCAAGAGCCAGTGGCTCTAACATATGGAGGAACAACAGCATGGATGTTTTCTCAACATCTGAACGCGAAGATGACGAAGAGGCTCTCAAATGGGCAGCCATAGAGAGACTCCCGACATATCTTCGAATTCGGAGAAGCATACTCAACAATGAAGATGGGAAAGGTAGAGAGGTTGACATCAAGCAACTGGGCCTCACAGAGAGAAAGATTATTGTGGAGAGGCTTGTGAAGATAGCAGAAGAAGATAATGAAAGGTTCTTGCTGAAACTCAGGGAAAGAATGGACAGAGTTGGGCTTGATATTCCGACAATTGAAGTTAGATTTGAGCATATAAATGTGGAAGCACAAGTTTATGTTGGAGGAAGAGCACTGCCTTCAATGCTGAACTTTTTTGCTAATGTAATTGAGGGGTTCTTAAATTATCTTCACATAATTCCAAGTCCAAAGAAACCGTTGCGTATACTTCAGAATGTTAGTGGAATCATAAAGCCTCGAAGAATGACATTGCTTTTGGGGCCACCAGGTTCTGGAAAGACCACTTTGCTGTTAGCGTTGGCTGGAAAACTTGATAAAGATTTGAATCATTCAGGGAGAGTAACATACAATGGGCATGGGCTTGAAGAGTTTGTGCCACAAAGGACTTCAGCTTATATAAGTCAATATGATAACCACATTGGAGAAATGACTGTGAGAGAAACTCTGGCTTTCTCAGCTAGATGCCAAGGGGTTGGACAGAACTATGAGATGTTGGCTGAGCTACTAAGAAGAGAGAAGCATGCAAAGATTAAACCGGATCCTGATATTGATGCCTATATGAAGGCTGCAGCACTAGGAAGACAACGGACGAGCGTGGTCACTGATTATATTCTCAAGATTTTGGGACTTGAAGTGTGTGCTGACATTATGGTAGGAGATGGAATGATAAGAGGTATCTCAGGAGGGCAGAAAAAGAGAGTCACAACAGGGGAGATGCTGGTTGGACCTATAAAGGTGTTATTCATGGACGAAATATCAACTGGTTTGGACAGTTCCACAACTTTTCAAATAATCAATTCTATCCGGCAATCCATCCATATTCTGAATGGAACTGCACTTGTGTCTCTGCTACAGCCAGCACCAGAAACTTATGAACTTTTTGATGATATAATACTATTAACGGATGGACAAATCGTGTACCAAGGACCAAGAGAAAATGTGGTAGAGTTTTTCGAATCAATGGGTTTTAAGTGTCCTGAAAGAAAAGGAGTTGCTGACTTCTTGCAAGAAGTGACATCAATAAAGGATCAATGGCAATATTGGGCACGTAAAGATGAACCTTATAGCTTTGTCACTGTCAAGGAATTTACTGAAGCATTCCAGCTATTTCACATAGGTCAAAATCTTGGAGAGGAGCTAGCCTGTCCATTTGACAAGTCTAAATGCCATCCAAATGTATTGACCACAAAGAAGTATGGTGTTAACAAAAAGGAGCTGCTGAGGGCTTGTGCCAGCAGGGAATTTTTGCTTATGAAGAGAAATTCATTTGTCTACATATTCAAAGTCACACAACTCATTTATTTAGCTGTCATGACAACAACATTATTTCTACGAACTAAGATGCATCGCAATACGGTGGAGGATGGAGGAACTTACATGGGTGCCCTTTTCTTTGCTGTCACCGTTGCGATGTTCAATGGCATATCAGAGCTAAATATGGCCATCATGAAACTTCCTGTCTTTTACAAGCAAAGGGACCTTCTTTTCTATCCTGCATGGGCTTATTCTCTTCCCCCATGGATTCTCAAAATACCAATTGCCCTCATAGAAGTAGCTATTTGGGAAGGCATCTCTTACTATGCCATTGGCTTTGATCCTAATTTTTACCTGATAATCCTGTGCATTAACCAGATGGCATCTTCGCTATTTCGGTTGATGGCAGCATTCGGAAGGGATGTTATAGTTGCAAATACTGTTGGAAGTTTTGCATTACTTATAGTTCTGGTTTTGGGAGGATTTGTGATTTCGCGAGAGAATGTGCACAAATGGTTTGTGTGGGGTTACTGGTCCTCACCACTGATGTATGGACAGAATGCTATAGCTGTGAATGAATTTCTTGGTCATAGTTGGAGAAAGGTTACTCCTAATTCCAATGAAACACTAGGAGTTTTGATACTGAAAACTCGTGGATTTTTCCCAGAAGCTTATTGGTATTGGATTGGAGTAGGAGCATTAATTGGTTATGTATTTTTGTATAATTTCCTGTTTACCTTGGCTTTGCAATATCTAAGTCCATTCAGAAAGGATCAAGCAGGGCTATCCCAAGAGAAATTGATTGAGAGAAATGCTTCAACAGCTGAAGAGTTGATTCAATTACCAAATGGAAAAATCTCTTCTGAAACAAAGATTGTAGAAGAAGCAAACTTACCATCCAGATCTTTTTCTGGAAGACTTAGTGATGATAAAGCTAACAGAAGTGGAAGGAAGGGTATGGTTCTTCCTTTTCAACCTCTATCTCTCACATTTGATGAGATAAAATATTCTGTAGACATGCCACAGGAAATGAAAAAGCAAGGAGTTTTTGAGGAACGTCTAGAACTTTTGAAGGGTGTTAGTGGTGTCTTTAGGCCAGGAGTACTAACAGCTCTGATGGGCGTAAGTGGTGCCGGTAAGACTACATTAATGGATGTTTTAGCTGGAAGGAAAACTGGTGGATATATTGAAGGAGGTATCACAATATCTGGGTACCCAAAGAGGCAAGAAACATTTGCTCGCATCTCAGGATATTGTGAACAATTTGATATCCACTCACCTAATGTTACAGTTTATGAATCTTTATTATATTCTGCATGGCTTCGGTTACCCCGTGAAGTTGATCACGCAACTAGAAAGATGTTCATTGAGGAAGTTATGGAGCTAGTAGAGCTTAATTCAATAAGAGAAGCGCTTGTTGGATTGCCAGGAGAGAATGGACTTTCAACCGAGCAGCGCAAGAGGCTTACAATTGCTGTTGAACTAGTAGCCAACCCATCAATAATATTCATGGATGAGCCAACCTCTGGCCTTGATGCTAGAGCAGCTGCAATTGTAATGAGAACCGTGAGGAATACCGTGAACACGGGACGAACTGTGGTTTGCACCATCCACCAGCCAAGTATTGATATATTTGATGCCTTTGATGAGCTGTTACTTTTGAAGTTGGGAGGGGAGCAAATATATGCTGGTCCATTAGGCCACCACTGTTCCGATCTGATTCAGTACTTTGAGGCTATTCAAGGAGTTCCTAAGATCAAAGAAGGTTATAATCCTGCAACCTGGATGTTGGAAGTTACATCAGCAGGCACAGAAGCATCTCTTAAGGTCAACTTCACCAATGTGTACAGAAACTCAGAACTATACCGGAGAAACAAGCAATTGATCAAAGAGCTTAGTATACCTCCTGAAGGTTCAAGGGATCTACACTTTGATAGTCAGTATTCACAGACTTTGGTGACACAATGTAAAGTTTGTCTATGGAAACAGCATTTATCATACTGGAGAAACACATCATATACAGCAGTTAGACTCCTATTTACAATGCTAATAGCATTATTATTTGGGATCATATTTTGGGACATTGGCCTGAAAAGGAGAAAAGAGCAAGATCTTTTCAATGCTATGGGTTCAATGTATGCTGCAGTTACCTTCATCGGAGTACAAAATGGTGCCTCGGTGCAGCCTATAATAGCGGTAGAGAGAACCGTCTTCTACAGAGAGAGAGCTGCTGGAATGTATTCAGCTTTGCCATATGCACTTGCACAGGTTATTATTGAACTTCCCCACATCTTGGTTCAGACCCTGATGTACGGAATTATAGTATATGCCATGATGGGATTCGATTGGACCACATCAAAGTTCTTGTGGTATCTTTTCTTCATGTACTTCACTTTCTTATACTTCACCTTCTATGGTATGATGACCCTAGCCATTACCCCCAACGCACACGTTGCTGCCATATTGTCCAGTGCATTCTATGCAATATGGAGCCTTTTCTCAGGCTTCATTATTCCCTTATCTAGAATACCCATATGGTGGAAGTGGTACTATTGGATCTGCCCTGTTGCATGGACCTTGAACGGATTGGTGGCTTCGCAATATGGAGACAACAGGGACAAACTTGAGAATGGTCAAAGGGTTGAAGAATTTGTGAAGAGTTATTTTGGGTTTGAACATGAATTTCTTGGGGTAGTTGCAATTGTGGTGGCCGGTTTCTCAGTGTTGTTTGCACTTATCTTCGCCTTTGGAATCAAAGTATTCAACTTCCAAAAACGATGA 4323 0.4101 MESSDISRVDSARASGSNIWRNNSMDVFSTSEREDDEEALKWAAIERLPTYLRIRRSILNNEDGKGREVDIKQLGLTERKIIVERLVKIAEEDNERFLLKLRERMDRVGLDIPTIEVRFEHINVEAQVYVGGRALPSMLNFFANVIEGFLNYLHIIPSPKKPLRILQNVSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLDKDLNHSGRVTYNGHGLEEFVPQRTSAYISQYDNHIGEMTVRETLAFSARCQGVGQNYEMLAELLRREKHAKIKPDPDIDAYMKAAALGRQRTSVVTDYILKILGLEVCADIMVGDGMIRGISGGQKKRVTTGEMLVGPIKVLFMDEISTGLDSSTTFQIINSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPRENVVEFFESMGFKCPERKGVADFLQEVTSIKDQWQYWARKDEPYSFVTVKEFTEAFQLFHIGQNLGEELACPFDKSKCHPNVLTTKKYGVNKKELLRACASREFLLMKRNSFVYIFKVTQLIYLAVMTTTLFLRTKMHRNTVEDGGTYMGALFFAVTVAMFNGISELNMAIMKLPVFYKQRDLLFYPAWAYSLPPWILKIPIALIEVAIWEGISYYAIGFDPNFYLIILCINQMASSLFRLMAAFGRDVIVANTVGSFALLIVLVLGGFVISRENVHKWFVWGYWSSPLMYGQNAIAVNEFLGHSWRKVTPNSNETLGVLILKTRGFFPEAYWYWIGVGALIGYVFLYNFLFTLALQYLSPFRKDQAGLSQEKLIERNASTAEELIQLPNGKISSETKIVEEANLPSRSFSGRLSDDKANRSGRKGMVLPFQPLSLTFDEIKYSVDMPQEMKKQGVFEERLELLKGVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGGITISGYPKRQETFARISGYCEQFDIHSPNVTVYESLLYSAWLRLPREVDHATRKMFIEEVMELVELNSIREALVGLPGENGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYAGPLGHHCSDLIQYFEAIQGVPKIKEGYNPATWMLEVTSAGTEASLKVNFTNVYRNSELYRRNKQLIKELSIPPEGSRDLHFDSQYSQTLVTQCKVCLWKQHLSYWRNTSYTAVRLLFTMLIALLFGIIFWDIGLKRRKEQDLFNAMGSMYAAVTFIGVQNGASVQPIIAVERTVFYRERAAGMYSALPYALAQVIIELPHILVQTLMYGIIVYAMMGFDWTTSKFLWYLFFMYFTFLYFTFYGMMTLAITPNAHVAAILSSAFYAIWSLFSGFIIPLSRIPIWWKWYYWICPVAWTLNGLVASQYGDNRDKLENGQRVEEFVKSYFGFEHEFLGVVAIVVAGFSVLFALIFAFGIKVFNFQKR 1440
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01956 1440 CDD ABCG_PDR_domain2 840 1078 IPR034003 -
Gma17g01956 1440 Pfam ABC-transporter N-terminal 90 141 IPR029481 -
Gma17g01956 1440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 423 IPR027417 -
Gma17g01956 1440 PANTHER ATP-BINDING CASSETTE TRANSPORTER 9 1440 - -
Gma17g01956 1440 PANTHER ABC-2 AND PLANT PDR ABC-TYPE TRANSPORTER FAMILY PROTEIN 9 1440 - -
Gma17g01956 1440 Pfam ABC transporter 166 348 IPR003439 GO:0005524
Gma17g01956 1440 Gene3D - 857 1093 IPR027417 -
Gma17g01956 1440 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 423 IPR003439 GO:0005524
Gma17g01956 1440 Pfam Plant PDR ABC transporter associated 713 774 IPR013581 -
Gma17g01956 1440 Gene3D - 153 456 IPR027417 -
Gma17g01956 1440 Pfam ABC-2 type transporter 502 708 IPR013525 GO:0016020|GO:0140359
Gma17g01956 1440 Pfam ABC-2 type transporter 1168 1382 IPR013525 GO:0016020|GO:0140359
Gma17g01956 1440 CDD ABCG_PDR_domain1 146 405 IPR034001 -
Gma17g01956 1440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 867 1081 IPR027417 -
Gma17g01956 1440 SMART AAA_5 175 400 IPR003593 -
Gma17g01956 1440 SMART AAA_5 880 1072 IPR003593 -
Gma17g01956 1440 Pfam ABC transporter 871 1023 IPR003439 GO:0005524
Gma17g01956 1440 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 843 1095 IPR003439 GO:0005524
Gma17g01956 1440 Pfam ABC-2 type transporter 381 432 IPR043926 GO:0140359
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma17g01956 Gma-Chr17 34918304 34926620 Dispersed/Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01956 K08711 - gmx:100810505 2813.1
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01956 17 34918304 34926620 Gma17g01956 17 34918304 34926620 ECH
Gma17g01956 17 34918304 34926620 Gma14g01132 14 16765843 16774603 GST
Gma04g00643 04 5915348 5922812 Gma17g01956 17 34918304 34926620 PCT
Gma06g00636 06 5739270 5746855 Gma17g01956 17 34918304 34926620 PCT