Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01953 ATGGCATCAGGGCTTTTTCGGATGATGGCTGCATTAGGAAGGAATATTGTAGTGGCAAACACTGCTGGGACATTTGCACTGCTTGCAGTTACAGCCTTTGGAGGATTTGTGATTTCACGAAAGGATGTGCACAAATGGTTGCTGTGGGGTTACTTTTCCTCACCACTGATGTATGGACAGGCTGCTATAGCTGTGAATGAATTTCTTGGGCATAGTTGGAGAAAGGTTAGTCCTAATTCCAATGAAACATTGGGAGTATTGATACTGAGATCTCATGGATTTTTCCCTGAAGCTTATTGGTATTGGATTGGAATAGGAGCATTGATTGGTTATGCTTTTCTGTTTAATTTTCTCTTCACCTTGGCTTTGCAATATCTCAATCCATTCAGAAATTATCAATCAGGGCTACCCCAAGAGAAGCTGCTCGAGAGAAATGCTTCAACAGCTGAAGAGTTCAATCAGTTACAAGCAAGAAAGAGCTCTTCTGATACAAAGATGGAAGAAGTTGGTGAAAATAACAAAGCTACTGATAGAGGAAAGAGAGGCATGGTTCTTCCTTTTCAACCTCTATCGCTCACTTTTGATGAGATAAGATACTCAGTAGACATGCCACAGGAAATGAAAAGTGAAGGAATCTCTGAGGATCGTCTAGAACTTTTGAAGGGTATTAGTGGTGCTTTTAGGCCAGGAGTACTAACAGCTCTGATGGGTATAAGTGGTGCTGGCAAGACTACTCTACTGGATGTTTTAGCTGGGAGGAAAACTAGCGGATACATCGAAGGAAGCATCACAATATCCGGATACCCAAAGAACCAAGAAACATTTGCTCGCATAGCAGGATACTGTGAACAATTTGATATCCACTCGCCCAATGTCACAGTTTATGAATCTTTGCTATATTCTGCATGGCTTCGTTTATCTCCCAAAGTTGATAAAGCAACTAGAAAGATGTTCATTGAGGAAGTTATGGAACTTGTAGAGCTTAATTCATTAAGAGAAGCACTTGTTGGATTGCCAGGAGAGACTGGACTGTCGACGGAGCAGCGCAAGAGGCTTACAATTGCAGTTGAACTTGTCGCCAACCCATCAATAATTTTCATGGATGAGCCAACCTCTGGCCTTGATGCTAGGGCAGCTGCAATTGTGATGAGAACTGTGAGGAACACCGTGGACACAGGACGCACTGTGGTTTGCACCATCCACCAACCAAGTATCGATATATTCGATGCCTTTGATGAGCTGCTACTTCTGAAATTGGGAGGGGAGCAGATATATGATGGTCCAATAGGAAACAACTCTTCCAATCTGATCCAGTACTTTGAGGCTATTCAAGGAATTCCTCAGATCAAAGATGGTTATAATCCAGCAACTTGGATGTTGGAAGTTACATCAGCAGCAAAAGAGGCAAATCTTAAGGTTGACTTCACAGAAGTGTACAAAAATTCAGAACTACACAGGAGAAACAAACAATTGATCCAGGAGCTTAGTTCACCTTCTCAAGGTTCAAAAGATCTATACTTTGATAGTCAGTATTCACAAAGTTTCGTGGCACAATTCATAGCTTGCCTATGGAAACAGCATTTGTCATATTGGAGGAACACATCATATACCGCAGTTAGACTCCTATTTACAACAATGGCAGGTTTATTGATGGGGGTGATTTTTTTGGACGTTGGCAAGAAAAGGAGAAAGGAGCAAGATGTTTTCAACGCAATGGGTTCAATGTATGCTGCTGTTACCTCCATTGGGGTTATAAATGGTGCCTCAGTGCAGCCTATAGTAGCAATTGAGAGAAATGTATTCTATAGGGAGAGAGCTGCAGGAATGTATTCAGCTTTGCCATATGCTCTTGCACAGGTTATTATAGAGCTTCCCCACATCTTGGCTCAGGCTCTGATATATGGTCTCATAGTATATGCCATGATGGGGTTCGAATGGACAACATCAAAGGTCTTCTGGTATCTCTACTACACTTACTTTACTTTCCTATACTACACTTTCTATGGTATGATGACCATGGCCATAACTCCTAACCCACATGTTGCGGCCATATTGTCCACCTCATTCTATGCAATATGGTGCCTTTTCTCAGGCTTCATCATTCCCTTATCGAGAATACCCGTATGGTGGAAATGGTACTATTGGATTTGCCCTGTTTCATGGACCTTGTATGGATTGGTGGCTTCCCAATATGGAGATGACATGGACAAACTTGAAAATGGTCAAAGGATTGATGAATTTGTGAAGAGTTATTTTGGGTTTGAACATGATTTTCTAGGAGTAGTTGCAATTGTGGTGGCTGGTTTCTCAGTGTTGTTTGCACTTATCTTCGCCTTTGGAATCAAAGTATTCAACTTTCAAAAACGATGA 2370 0.416 MASGLFRMMAALGRNIVVANTAGTFALLAVTAFGGFVISRKDVHKWLLWGYFSSPLMYGQAAIAVNEFLGHSWRKVSPNSNETLGVLILRSHGFFPEAYWYWIGIGALIGYAFLFNFLFTLALQYLNPFRNYQSGLPQEKLLERNASTAEEFNQLQARKSSSDTKMEEVGENNKATDRGKRGMVLPFQPLSLTFDEIRYSVDMPQEMKSEGISEDRLELLKGISGAFRPGVLTALMGISGAGKTTLLDVLAGRKTSGYIEGSITISGYPKNQETFARIAGYCEQFDIHSPNVTVYESLLYSAWLRLSPKVDKATRKMFIEEVMELVELNSLREALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYDGPIGNNSSNLIQYFEAIQGIPQIKDGYNPATWMLEVTSAAKEANLKVDFTEVYKNSELHRRNKQLIQELSSPSQGSKDLYFDSQYSQSFVAQFIACLWKQHLSYWRNTSYTAVRLLFTTMAGLLMGVIFLDVGKKRRKEQDVFNAMGSMYAAVTSIGVINGASVQPIVAIERNVFYRERAAGMYSALPYALAQVIIELPHILAQALIYGLIVYAMMGFEWTTSKVFWYLYYTYFTFLYYTFYGMMTMAITPNPHVAAILSTSFYAIWCLFSGFIIPLSRIPVWWKWYYWICPVSWTLYGLVASQYGDDMDKLENGQRIDEFVKSYFGFEHDFLGVVAIVVAGFSVLFALIFAFGIKVFNFQKR 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01953 789 Pfam Plant PDR ABC transporter associated 73 133 IPR013581 -
Gma17g01953 789 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 430 IPR027417 -
Gma17g01953 789 SMART AAA_5 229 421 IPR003593 -
Gma17g01953 789 Gene3D - 206 440 IPR027417 -
Gma17g01953 789 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 789 - -
Gma17g01953 789 Coils Coil 138 158 - -
Gma17g01953 789 CDD ABCG_PDR_domain2 189 427 IPR034003 -
Gma17g01953 789 Pfam ABC-2 type transporter 518 731 IPR013525 GO:0016020|GO:0140359
Gma17g01953 789 Pfam ABC-2 type transporter 1 68 IPR013525 GO:0016020|GO:0140359
Gma17g01953 789 Pfam ABC transporter 220 372 IPR003439 GO:0005524
Gma17g01953 789 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1 789 - -
Gma17g01953 789 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 192 445 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01953 Gma-Chr17 34797223 34803688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01953 213 404 Calmodulin-binding Proteins AT2G36910 26.087 2.84e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01953 K08711 - gmx:100800368 1544.25