Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01905 ATGTCAGAGTTGGAAAGTAGTGACAATTTTTGTAGCTTCGTGAATGGTGATGGTTTGTTGAAAGAGGAATGTATAAGTATTGATAGCATGGTAGATATTAGACAATTTGACATGGAAGAAATTACCGATGAAGTTGTCCGCAGGTTGGATTTTGGTGATTTGGAGTTAGCGTATCAGTTCTATTGTTGGTATGCTAAAATTAGTGGTTTTTTAGTAAGAAAGAGTCATATTGTTAGAAACACATGTATGGAAACATTGCAACAAACATTTGTTTGTTCATGTGCTGGTTATAGGAGAGTTTCAACATCAGATAGAAGGATGCGGCGAGAAAAAAAGAAAGCAGGTGTGGTTATGAAGCAATGTTTCGTGTTCATGTGCATTTTTGTACGGGACGATGGACATAGGAAGATGTCCGCATATGATATTATGCAAGTTGAAAACTATAGAAAAGTTGGGATTAGACCTCCGCACATGTACGCAACATTTGCCAATCAATGTGGTGGATATGACAAGGTGGAGTTTATTAGGAAAGATATTAACAATGAAGAAGGGCGCATGAGAAAGCAACATACTTCAGATGCAAGTGGTGCATTGAAGTATTTACATGATTTACGCAAGaaagatccaatgatcCATGTTCGAGACAAACAAGTTTTGAAATGGTTGAAGAAGCTAATGCTTGGTGATTTTGAAGTGGTTGAATTTGAAGAAAAATGGAAAGAGATGGTTGCTACGTTTGAATTGGAAGACAATACTTGGATTGCTGAACTGAATATTAAGCTAAGAGTCGTTGATTGCAAAGAGATGGCCACGTTCTCAATTTACACGGTTGTCAAGTACTATAGTGGAAGTGTTTGGCTTGTGTCCTATTGCCCATCGACGGTTGACTTTAGTTGTAGTTGTATGAGAATGCAATCCATTGGTCTTCCATGTGATCACATATTGGTTGTGTTGGTTTCTTTAAATTTTATGGAGTTGCCAAGTAGTTTGGTTTTGAATAGGTGGTCAAAAGTTGCCACAGAAAATATCAAAGACAAATATCCAAATTCTGCAATGTATTGGGATTCCCAATTGATGGCCAGGTATGCCACTTTGGTTGAAGTTTCTAGACAAGTTTGCGAAGCTGCATATTATGATGAAGACGAGTATGACAAAATGTTGTGTTTCCTGTCAAATGAGGTTAAAAGGCTAAAGTCGAAGAAAAATAGCGAACCATGTATCGATGACAATGATGAGCAGGCAGATCAGCAGGGTCATAATTATGATGGTATTTTAGACCCTGTTGTTGTTCGAACTAAAGGATGCGGACAAGTTGGAGTAAATGAATCTGGGAAGCAAAGAAGAATCCAAAAGTGTGGGCAATGTGGTGGAAGTGGCCACAATAAGCGGTCTTGCACCAATCGTCCTCGAAATGCAAATGTTTGTGTTTGTGGTTCGTTTATTTCATCAAGCGAACAAACTAACACCATGTGTCAACCTATAGATGAATATAACTATCAACtggtgtttgagaatgcaacacaaatttag 1530 0.3699 MSELESSDNFCSFVNGDGLLKEECISIDSMVDIRQFDMEEITDEVVRRLDFGDLELAYQFYCWYAKISGFLVRKSHIVRNTCMETLQQTFVCSCAGYRRVSTSDRRMRREKKKAGVVMKQCFVFMCIFVRDDGHRKMSAYDIMQVENYRKVGIRPPHMYATFANQCGGYDKVEFIRKDINNEEGRMRKQHTSDASGALKYLHDLRKKDPMIHVRDKQVLKWLKKLMLGDFEVVEFEEKWKEMVATFELEDNTWIAELNIKLRVVDCKEMATFSIYTVVKYYSGSVWLVSYCPSTVDFSCSCMRMQSIGLPCDHILVVLVSLNFMELPSSLVLNRWSKVATENIKDKYPNSAMYWDSQLMARYATLVEVSRQVCEAAYYDEDEYDKMLCFLSNEVKRLKSKKNSEPCIDDNDEQADQQGHNYDGILDPVVVRTKGCGQVGVNESGKQRRIQKCGQCGGSGHNKRSCTNRPRNANVCVCGSFISSSEQTNTMCQPIDEYNYQLVFENATQI 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01905 509 ProSiteProfiles Zinc finger SWIM-type profile. 275 322 IPR007527 GO:0008270
Gma17g01905 509 MobiDBLite consensus disorder prediction 401 420 - -
Gma17g01905 509 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 262 400 IPR031052 GO:0006355
Gma17g01905 509 PANTHER OS03G0181600 PROTEIN 262 400 - -
Gma17g01905 509 MobiDBLite consensus disorder prediction 401 416 - -
Gma17g01905 509 SMART 26again6 297 324 IPR006564 GO:0008270
Gma17g01905 509 Pfam FAR1 DNA-binding domain 59 134 IPR004330 -
Gma17g01905 509 PANTHER OS03G0181600 PROTEIN 30 158 - -
Gma17g01905 509 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 30 158 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01905 Gma-Chr17 33220889 33223244 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma17g01905 FAR1 2.1e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01905 - - gsj:114373058 378.252