Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01886 ATGGAGTTCAGAGAACCTGAGGAGTTATGCTCTGAGCCTCTAAGAGTCCAACAGCAACTCTTAGACGATGAAACACGTGCCCTTCAGGTGGAATTGACTAGTCTTCTCAATACAGGTCAAGAAACCGAAACTAACATGGTGGAGATGTCTGCACTAAATCACCTCATGTCTACACATGTTTTGCATCAAGCTCAGCAAATTGAGCATCTGTATGATCAAGCTGTTGAAGCTACTAAGAATGTTGAGCTTGGTAACATAGAACTCTCACGAGCCATTCAGAGGAATAGCAGCAGCAGGACATTTCTTTTACTATTTCTATCTGTGCTTACTTTTTCAATCCTCTTTCTTGATTGCTTCTTTCTGGATGAAACTGTATTCATCATAATTGTAAAGAAGAGCAATCTGGGGATTGCTCTTGTTGGAGTTGGTTGTGAACAAAACAAGGTTGATGTTAGGGTGGACAATAAGCTTCGAAAGACTAGTGAAATAGTACTTGGGTTGAGTGGAGCCTACATAGACTGA 522 0.41 MEFREPEELCSEPLRVQQQLLDDETRALQVELTSLLNTGQETETNMVEMSALNHLMSTHVLHQAQQIEHLYDQAVEATKNVELGNIELSRAIQRNSSSRTFLLLFLSVLTFSILFLDCFFLDETVFIIIVKKSNLGIALVGVGCEQNKVDVRVDNKLRKTSEIVLGLSGAYID 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01886 173 PANTHER SYNTAXIN-18 7 117 - -
Gma17g01886 173 Gene3D - 23 121 - -
Gma17g01886 173 PANTHER SYNTAXIN-18 7 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01886 Gma-Chr17 32836062 32838042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01886 22 119 SNARE and Associated Proteins AT1G51740 80.612 3.99e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01886 K08492 - gmx:100778011 194.512