Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01883 ATGACTTTGGTTAAGAAGCTCCGCAAAGCAAAAAGGGAAGCACCAACAAGTGAGAAGCCAGAACTAGTGCGCACTTATCTCTGCAACATGATTATTGTGCCTGAGATGAGTGGTAGCATCACTAGAATCTACCATGGAAAAACCTTCAACCATGTTGAAATCAAACCCGAGATGATTGGACATTATCTCATTGAGTTCACTATTTCATACAAACCCGTCAAGCATGATAGTTTCATACCTAACACATCTAACCGATAA 258 0.4031 MTLVKKLRKAKREAPTSEKPELVRTYLCNMIIVPEMSGSITRIYHGKTFNHVEIKPEMIGHYLIEFTISYKPVKHDSFIPNTSNR 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01883 85 PANTHER 40S RIBOSOMAL PROTEIN S15-4 1 77 - -
Gma17g01883 85 PRINTS Ribosomal protein S19 family signature 25 44 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gma17g01883 85 PRINTS Ribosomal protein S19 family signature 45 57 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gma17g01883 85 PRINTS Ribosomal protein S19 family signature 57 72 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gma17g01883 85 PIRSF RPS19p_RPS19a_RPS15e_RPS19o 1 85 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gma17g01883 85 Gene3D 30s Ribosomal Protein S19; Chain A 1 84 IPR023575 GO:0003735|GO:0005840|GO:0006412
Gma17g01883 85 SUPERFAMILY Ribosomal protein S19 3 76 IPR023575 GO:0003735|GO:0005840|GO:0006412
Gma17g01883 85 Pfam Ribosomal protein S19 2 75 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gma17g01883 85 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 1 77 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01883 Gma-Chr17 32609473 32609730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01883 1 76 Cytoplasmic Ribosomal Protein Gene Family AT5G09510 78.947 3.76e-39 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01883 K02958 - ppp:112290886 125.176