Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01879 ATGACTAGGGGTAGGGGGACTCCTGGTTATGCTGCACTTGAACTTTGGATGCCTAATTTTCCTGTGACTCACAAGTGCTATGTTTATAGTTTTGGAATTCTATTATTTGAAATCATAGGCAGGAGAAGAAACCTTGGCGTTCAACTTGTCGAAAGCCAGGAGTGGTTTCCAATATGGATTTGGAAAAGGTTTGATGCTGGAGAATTTCAGAAGTTGATAATAGCATGTGGGATAAAGGAGAAAAATAGGGAGATTACAGAGAGAATGGTTGACGTAGCTCTATCCTTTGTTCAATATAGGCCAGATTCAAGGCCTATAATGAGTGATGTGGTGAAAATGCTGGAAGGTTCAGTGGAAATTCTGAAACCTTTGAACCCATTTCAGCCATTTATGGATGGGAATTTCACTTCTCATCCAGTCCAAGTGCCACTAACCTACACTACAGATACTAATGGTTTTTCTGATGTGGTAACTGACTCTAGCATTGTACATGTTACTCTTATACTATAA 510 0.3961 MTRGRGTPGYAALELWMPNFPVTHKCYVYSFGILLFEIIGRRRNLGVQLVESQEWFPIWIWKRFDAGEFQKLIIACGIKEKNREITERMVDVALSFVQYRPDSRPIMSDVVKMLEGSVEILKPLNPFQPFMDGNFTSHPVQVPLTYTTDTNGFSDVVTDSSIVHVTLIL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01879 169 Gene3D Transferase(Phosphotransferase) domain 1 1 121 - -
Gma17g01879 169 PANTHER PUTATIVE-RELATED 4 161 - -
Gma17g01879 169 SUPERFAMILY Protein kinase-like (PK-like) 2 127 IPR011009 -
Gma17g01879 169 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 161 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01879 Gma-Chr17 32526854 32527363 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01879 1 129 Receptor kinase-like Gene Family AT5G38280 38.971 2.30e-20 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Gma17g01879 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01879 - - gmx:100815859 229.18