LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma17g01874	ATGGCTGGGGCGGTGATGGGTGGTGAGGTGCACACGATTATGGCCCCTATTGAGAGGGCGAAACTATTGTTGCAGACCCAAGAGAGCAACTTGACAATTGTCGCGAGTGGGCGTCTCAGATTCAAGGGCATGTTGGATTGCATAGCCCGTACGGTTAGGGAAGAAGGCATTCTCTCTTTGTGGAGAGGCAATGGCAGCAGTGTTATTCGTTACTATCCTTCTGTCGCTCTCAATTTCTCTCTCAAGGTTGTTACCCTTCCTCTCTTCTTTTCTATTTTCTTTTCTTTTGCCTATCTCGTTATGCACCAAAATCAGATTCCTTCGTCTGTTGTGTCCGCTAATTACTGA	348	0.4713	MAGAVMGGEVHTIMAPIERAKLLLQTQESNLTIVASGRLRFKGMLDCIARTVREEGILSLWRGNGSSVIRYYPSVALNFSLKVVTLPLFFSIFFSFAYLVMHQNQIPSSVVSANY	115

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma17g01874	115	PRINTS	Mitochondrial carrier protein signature	12	26	IPR002067	GO:0055085
	Gma17g01874	115	PRINTS	Mitochondrial carrier protein signature	63	83	IPR002067	GO:0055085
	Gma17g01874	115	PRINTS	Adenine nucleotide translocator signature	41	62	IPR002113	GO:0005471\|GO:0005743\|GO:0140021\|GO:1990544
	Gma17g01874	115	PRINTS	Adenine nucleotide translocator signature	74	86	IPR002113	GO:0005471\|GO:0005743\|GO:0140021\|GO:1990544
	Gma17g01874	115	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	1	88	IPR018108	-
	Gma17g01874	115	SUPERFAMILY	Mitochondrial carrier	2	92	IPR023395	-
	Gma17g01874	115	Gene3D	Mitochondrial carrier domain	1	110	IPR023395	-
	Gma17g01874	115	PANTHER	ADP,ATP CARRIER PROTEIN-RELATED	1	85	-	-
	Gma17g01874	115	PANTHER	ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED	1	85	IPR002113	GO:0005471\|GO:0005743\|GO:0140021\|GO:1990544
	Gma17g01874	115	Pfam	Mitochondrial carrier protein	2	89	IPR018108	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma17g01874	Gma-Chr17	32494300	32494647	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma17g01874	1	96	Antiporters	AT4G28390	45.918	1.40e-22	88.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma17g01874	K05863		-	gmx:100797251	153.68