Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01870 ATGGAAGCTTCTAGAATAGAGAATTTGATTAGAGCCAAGAAATCATTGAAGATAAGCTTAGAGAAATCAAAATCGGTAGGTTTAGCATTAGAGAAGGCGGGGCCGAGGTTAGATGAAATTAGGGTGAGGCTTCCGTCGCTGGGATCGGCAGTGCGGCCGATTCGCGCCGAGAAGGACGCCCTCGCGGCGGTCGGCGGCCACATCAACCGTGCGGTGGGCCCCGCTGCAGCGGTGCTCAAGGTTTTCGACGCCGTCCACGGCCTCGAAAAGTCACTCCTGTCGGATCCCCGGACCGACCTGGCCGGATACTTGTCGGTGCTGAAGCGCCTCCAGGAGGCTCTGAGGTTCCTGGGAGACAATTGTGGGCTGGCCATACAGTGGTTGGAAGATATAGTTGAGTATTTGGAGGACAATTCTGTTGCTGATAAGGTTTATCTTGCGAATTTGAAGAAGGAGTTGAAGAATCTTCGCGAGTCGCAGCACGGGGAGCTTGATGGAGGGTTGCTGGATGCTGCATTGGGTAAATTGGAGGATGAGTTTAGGTTGCTGTTGAGTGAGAATAGTGTGCCGTTGCCTATGGCGTCCGCGAGCGGGGATCAGGCGTGCATTGCGCCATCACCATTGCCGGTGTCGGTTGTTCACAAGCTGCAGGCGATTCTCGGGAGGTTGATTGCCAATGACAGGCTGGATAGGTGTGTGGGGATTTATGTTGAGGTGAGGAGTTCGAATGTGAGGGCGAGTTTGCAGGCGCTGAATTTGGATTACCTTGAGATTTCTTTGTCGGAGTTTAATGATGTGCAGAGCATTGAGGGGTATATTGCTCAGTGGGGGAAGCATTTGGAGTTCGCAGTGAAGCACTTGTTTGAGGCCGAGTATAAGCTTTGCAATGATGTGTTTGAGAGGATTGGGTTGGATGTGTGGATGGGTTGCTTTTCAAAGATTGCTGCACAGGCTGGTATACTCGCTTTTCTTCAGTTTGGGAAGACGGTCACGGAGAGTAAGAAGGACCCTATTAAGCTTTTGAAGTTGTTGGATATTTTCGCGTCGTTGAATAAGTTGAGGCTGGATTTCAACCGGCTTTTTGGTGGTGCGCCGTGTGTTGAGATACAGAATTTGACAAGGGATCTTATTAAGAGCGTGATTGATGGGGCTGCGGAGATTTTTTGGGAGCTTTTGGTTCAGGTGGAGTTGCAAAGGCCGAATCCACCCCCAATGGATGGTAATGTGCCGAGATTGGTGAGCTTTATCACTGATTACTGTAACAAGCTCCTTGGGGATGACTATAAACCAATACTGACTCAGGTCCTGATCATTCACAGAAGTTGGAAGCGCCAAAGCTTTCAGGAGAAACTCCTTGTCAACGAGATTTTGAACATAGTGAAGGCTGTTGAACAGAATGTGGAGACTTGGATCAAGGCTTATGATGATCCTATACTGTCCAACTTTTTTGCTATGAACAATCACTGGCATCTGTGCAAGCATTTGAAGGGGACAAAACTTGGGGAGCTCTTGGGGGATTCTTGGTTAAGGGAGCATGAACAGTATAAGGACTATTACTCTACCATCTTCTTGAGGGACAGTTGGGGAAAGCTTCCTGGACATTTGAGTAGGGAAGGGTTGATTCTTTTCTCGGGAGGGCGTGCCACTGCCCGTGACCTGGTCAAGAAAAGGTTGAAGAAGTTCAATGAAGTTTTCGATGAGATGTATGCGAAGCAGACAAGTTGGATCATGCCAGAACGAGATCTGAGGGAGAAGACATGCCAGCTTATAGTGCAAGCGGTGGTGCCTGTTTACCGCAGTTACATGCAGAATTATGGTCCTTTGGTTGAGCAAGATGCTAGCTCTACAAAATATGCAAAGTACACAGTGCAGAAGCTGGAGGAAATGCTTTTGTGTCTATATCGGCCAAGACCTGTAAGACATGGCAGCTTGAGAAGTTCAACATTTAGTGCAAAATATGGGAATGGAGTACCCGATCTTCGCAGAACAGCATCTGCAGTTGTGTAA 2007 0.4853 MEASRIENLIRAKKSLKISLEKSKSVGLALEKAGPRLDEIRVRLPSLGSAVRPIRAEKDALAAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRTDLAGYLSVLKRLQEALRFLGDNCGLAIQWLEDIVEYLEDNSVADKVYLANLKKELKNLRESQHGELDGGLLDAALGKLEDEFRLLLSENSVPLPMASASGDQACIAPSPLPVSVVHKLQAILGRLIANDRLDRCVGIYVEVRSSNVRASLQALNLDYLEISLSEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGAPCVEIQNLTRDLIKSVIDGAAEIFWELLVQVELQRPNPPPMDGNVPRLVSFITDYCNKLLGDDYKPILTQVLIIHRSWKRQSFQEKLLVNEILNIVKAVEQNVETWIKAYDDPILSNFFAMNNHWHLCKHLKGTKLGELLGDSWLREHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYAKQTSWIMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDASSTKYAKYTVQKLEEMLLCLYRPRPVRHGSLRSSTFSAKYGNGVPDLRRTASAVV 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01870 668 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 657 - -
Gma17g01870 668 Pfam Exo70 exocyst complex subunit 275 630 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma17g01870 668 Gene3D Exocyst complex component Exo70 76 641 - -
Gma17g01870 668 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 657 IPR004140 GO:0000145|GO:0006887
Gma17g01870 668 SUPERFAMILY Cullin repeat-like 78 634 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01870 Gma-Chr17 32304015 32306610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01870 6 668 EXO70 exocyst subunit family AT4G31540 73.855 0.0 1035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01870 K07195 - gmx:100796139 1297.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01870 17 32304015 32306610 Gma14g01226 14 19923803 19926185 GST