Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01869 ATGGCTGTGGAACTCATGGGGTTCCCAAAACTAGACGAACAAAAGGCCATTCAAGAAGCCGCATCAGAAGGCCTCAAGGGCATGAAACACCTGATCCGAACCCTTTCCAACCAACCCTCTCACTTAAACACCGAACTTACCGACGTTACCGTTTCAAAGTTCAAGAAACTTATTTCACTCTTAAATCGAACCGGCCACGCCCGGTTCAGACGCGCCCCGGTTCAGTACTCATCTCCACACGCACCCGTTCACAACACTAACGCTTCCACCTCATCAATTCAACTCCCTCCTCCGCCGCAAAACCCTAATATTCCCGCGCTGGCGCAGTTTCCTACTCCGGCGCCGGTGGCCGTGCACCACACGCCGGTGACGCTCGATTTCACGAAGCCGCACAACGCGCTTCTGAGCTCCAACGCCAAATCCGTCGAGCTCGAGTTCTCGAAGGAAACCTTCAGCGTTTCCTCTAACTCCTCTTTCATGTCCTCCGCGATCACCGGCGACGGCAGCGTCTCCAATGGGAAGATTTTCCTCGCGCCACCGGCGACCTCCGCCGGAAAACGTCCGGCGTTCAAGAAGCGGTGCCACGAACACCGCGAACACTCCGACGATGTCTCCGGCAACAGCAAGTGCCACTGCGTTAAGCGAAGGAAAAATAGGGTGAAGAGCACTGTGAGAGTGCCGGCGATTAGTTCAAAAGTCGCCGATATTCCACCGGACGAGTACTCGTGGAGGAAGTACGGTCAGAAACCGATCAAGGGTTCCCCATACCCAAGGGGTTACTACAAGTGCAGCACGATTAGAGGGTGCCCAGCGAGGAAGCACGTGGAGCGCGCACCAGACGATCCTGCAATGCTGATAGTGACGTACGAGGGGGAGCACAGGCACGCGGTTCAGGCTGCGATGCAGGAGAACGCAGCCGGGGTGGTGGGGTTGGTGTTCGAGTCAACGTAG 951 0.5647 MAVELMGFPKLDEQKAIQEAASEGLKGMKHLIRTLSNQPSHLNTELTDVTVSKFKKLISLLNRTGHARFRRAPVQYSSPHAPVHNTNASTSSIQLPPPPQNPNIPALAQFPTPAPVAVHHTPVTLDFTKPHNALLSSNAKSVELEFSKETFSVSSNSSFMSSAITGDGSVSNGKIFLAPPATSAGKRPAFKKRCHEHREHSDDVSGNSKCHCVKRRKNRVKSTVRVPAISSKVADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTIRGCPARKHVERAPDDPAMLIVTYEGEHRHAVQAAMQENAAGVVGLVFEST 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01869 316 ProSiteProfiles WRKY domain profile. 232 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g01869 316 Pfam Plant zinc cluster domain 191 235 IPR018872 -
Gma17g01869 316 SMART WRKY_cls 237 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g01869 316 MobiDBLite consensus disorder prediction 75 95 - -
Gma17g01869 316 Pfam WRKY DNA -binding domain 239 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g01869 316 Gene3D WRKY domain 221 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma17g01869 316 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 314 IPR044810 GO:0003700
Gma17g01869 316 SUPERFAMILY WRKY DNA-binding domain 235 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma17g01869 316 MobiDBLite consensus disorder prediction 79 94 - -
Gma17g01869 316 PANTHER WRKY PROTEIN 12 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01869 Gma-Chr17 32246921 32249898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01869 1 315 WRKY Transcription Factor Family AT2G24570 59.467 2.18e-113 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma17g01869 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01869 - - gmx:100791219 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01869 17 32246921 32249898 Gma17g01869 17 32246921 32249898 ECH