Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01859 ATGTATGCAATTGCAGACTTTGTTGATTATTACAGATGGAAGAAGGTAATTGCCATTTACGTAGATGATGACAATGGAAGGAATGGAGTTTCTGTTTTGGGGGATGCAATGTCAAGGAAACGTGCCAAGATCTCTTACAAGGCTGTTTTCCCTCTTGGTGCCACAGAAAGTGATATCAGTGACTTGTTAAATGAGGTGAACTTAGTGGAATCGCGTGTCTATGTTCTACATGTAAATCCTGATCATGGTTTAACACTTTTCTCTATTGCCAAGAGACTAAGAATGATGGACAGTGGATATGTTTGA 306 0.3922 MYAIADFVDYYRWKKVIAIYVDDDNGRNGVSVLGDAMSRKRAKISYKAVFPLGATESDISDLLNEVNLVESRVYVLHVNPDHGLTLFSIAKRLRMMDSGYV 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01859 101 Pfam Receptor family ligand binding region 2 101 IPR001828 -
Gma17g01859 101 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 101 - -
Gma17g01859 101 Gene3D - 1 101 - -
Gma17g01859 101 PANTHER GLUTAMATE RECEPTOR 1 101 - -
Gma17g01859 101 SUPERFAMILY Periplasmic binding protein-like I 2 101 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01859 Gma-Chr17 31909158 31909463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01859 1 101 Ion Channels AT2G32390 68.317 2.32e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01859 K05387 - gmx:100792741 194.897