LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma17g01854	ATGGCTCTTAGAAGAGCATATTATTGCCTTCTTATGCTGTTGGTGTTGGCCAATATTTGTTTTGTGCCATTGTTGGGAGACACAAATGCTCAAATTTTGATGAGGTTCAAAGCTTCCTTGTCCAATAACAATGCCTTAAACAACTGGGTGAACGAGTCTAGTTTATGTAGTTGGAGAGGTTTGTTATGCAACCACACTGACCAAACATTTTATGGTTTGAGACTAGAGAATATGAGTCTAGGGGGGAACATTGACGTAGACACCTTGTTTGAATTGCCAACTTTGACAAGCTTTAGTGTCATGAACAATACATTTGAGGGTCCAATTCCTGAGTTCAAAAAGCTTGTGAAGTTAAGGGCATTGTTTCTGTCCAATAACAAGTTCTCTGGTGATATTCCAGATGATGCTTTTGAGGGCATGACAAAACTGAAAAGGGTTTTCTTGGCAGAAAATGGCTTCACGGGTCATATTCCTAAGTCACTTGCTAACTTGCCTAGACTTTGGGATTTGGACTTGCGAGGGAACAGTTTTGGAGGCAATATACCAGAGTTTCGACAAAAGGTTTTCAGAAATTTTAATTTGTCAAATAACCAATTGGAGGGTCCAATACCAAAAGGCTTAAGCAACAAGGATCCAAGCTCATTTGCTGGCAACAAAGGCCTATGTGGAAAACCGATGAGTCCGTGCAATGAGATTGGCCGCAACGAGTCAAGATCAGAGGTTCCAAACCCTAATTCACCTCAAAGAAAGGGAAACAAACATAGAATCCTTATAACTGTCATTATAGTGGTGGCAGTGGTTGTTGTTGCTTCAATAGTAGCACTTCTATTTATCCGTAACCAAAGGAGAAAAAGGTTAGAACCCTTAATATTAAGCAAGAAGGAGAATTCCAAGAACAGTGGAGGCTTCAAGGAGTCACAATCATCCATTGATCTGACAAGTGATTTCAAGAAGGGTGCTGATGGGGAATTGAACTTTGTTAGGGAAGAGAAAGGGGGCTTTGATTTGCAAGACCTGCTTAGAGCTTCAGCTGTGGTTCTTGGTAGTGGCAGTTTCGGGTCCACATACAAGGCCATGATTTTGAATGGACCAACAGTCGTTGTGAAGAGGTTTAGGCACATGAACAACAATGTCGGGAAACAGGAGTTCATTGAGCACATGAAAAGGCTTGGAAGTTTGACACACCCTAATCTTCTCCCTCTTGCTGCATTCTACTACCGAAAAGAAGACAAGTTTTTGATTTATGACTATGCTGAAAATGGTAGCTTGGCCAGTCATCTACATGGTAGAAATAACTCAATGCTAACCTGGTCAACCCGTTTGAAAATCATAAAAGGAGTAGCTAGAGGCTTAGCCTACCTCTATGAAAGCCTCCCTAGCCAAAACCTTCCACATGGTCATCTCAAGTCCTCCAATGTGATTTTGGACCATTCATTTGAGCCACACTTGACAGAGTATGGCCTTGTGCCAGTGATGAGCAAGAGCCACGCTCAGCAGTTCATGGCAGCCTACAAGGCCCCAGAGGTGATCCAATTTGGGAGGCCTAATGTGAAAAGTGATGTGTGGTGTCTTGGTATCATGATTCTAGAGCTACTAACAGGAAAATTCCCAGCAAATTATCTGAGGCATGGGAAGGGTAGGAACAATAATGCCGACTTGGCAACATGGGTGGATTCAGTAGTGAGAGAAGAGTGGACTGGTGAGGTGTTTGATAAAGACATTATGGGGACCAGGAATGGGGAGGGTGAGATGTTGAAGTTACTGAGGATTGGAATGTTTTGCTGCAAATGGAGTGTGGAGAGTAGGTGGGATTGGAGGGAGGCATTGGGAAAGATTGAGGAGTTAAAGGAGAAGGATAGTGATGAGGAGTACTACTCTTCTTATCTCAATGTGGGGACATACATTGGATCAAGGGGTGGCTTCAACATTGCAGTTGTAGGTTTGGTTATTGGGATTTTGATTGAGGGCCTTTATAGAGGATCTGAAAACAATGAGATGCGCCCTGGGGTCTGTTTAAGAAGAAATGATGTATTGGAGCCTATGATAAAGCCCCGGTGGTATGTCAATTGCAATGATTTGGAAAAACAAGCTCTTCCTACTGTTGTGGATGAGGAAAACAAAAGGATAGAGATTATTCCAAAACAATATTTGGCTGATTGGAAGAGATACTTATATCTTTGTTTGCTTTTTGCAAATTCTTGTAATGAGCATGGTAAAATTTATCCAACAGAGCATTTCTCTATAATGATTTATTTGCATCCCATGGTTTGTGATGCACATGGACACAAGATGTCCAAGCCCTTAGGAAATGTTATTGATCCCATTGAAGTGATAAATGGGATATCACTTGAAGGTCTACATAAGAGGTTGGAGGTTGGTAACCTGGACCCCAAAGAACTAGCCACTACTATAGAGAGTCAGAAGAAGGACTTTCCAAATGGTATTGATGAATGTGGTGTTGATGCTCTCCGTTTTGCACTGGTTTCATACATAGCTCAGTCTGACAAAACTAACCTAGACATTCAAAGGGTGGTTGGGTATCTCCAATGGTGTAATAAACTCTCGGTGGATACTCTTGGTGTTAAATAA	2589	0.4183	MALRRAYYCLLMLLVLANICFVPLLGDTNAQILMRFKASLSNNNALNNWVNESSLCSWRGLLCNHTDQTFYGLRLENMSLGGNIDVDTLFELPTLTSFSVMNNTFEGPIPEFKKLVKLRALFLSNNKFSGDIPDDAFEGMTKLKRVFLAENGFTGHIPKSLANLPRLWDLDLRGNSFGGNIPEFRQKVFRNFNLSNNQLEGPIPKGLSNKDPSSFAGNKGLCGKPMSPCNEIGRNESRSEVPNPNSPQRKGNKHRILITVIIVVAVVVVASIVALLFIRNQRRKRLEPLILSKKENSKNSGGFKESQSSIDLTSDFKKGADGELNFVREEKGGFDLQDLLRASAVVLGSGSFGSTYKAMILNGPTVVVKRFRHMNNNVGKQEFIEHMKRLGSLTHPNLLPLAAFYYRKEDKFLIYDYAENGSLASHLHGRNNSMLTWSTRLKIIKGVARGLAYLYESLPSQNLPHGHLKSSNVILDHSFEPHLTEYGLVPVMSKSHAQQFMAAYKAPEVIQFGRPNVKSDVWCLGIMILELLTGKFPANYLRHGKGRNNNADLATWVDSVVREEWTGEVFDKDIMGTRNGEGEMLKLLRIGMFCCKWSVESRWDWREALGKIEELKEKDSDEEYYSSYLNVGTYIGSRGGFNIAVVGLVIGILIEGLYRGSENNEMRPGVCLRRNDVLEPMIKPRWYVNCNDLEKQALPTVVDEENKRIEIIPKQYLADWKRYLYLCLLFANSCNEHGKIYPTEHFSIMIYLHPMVCDAHGHKMSKPLGNVIDPIEVINGISLEGLHKRLEVGNLDPKELATTIESQKKDFPNGIDECGVDALRFALVSYIAQSDKTNLDIQRVVGYLQWCNKLSVDTLGVK	862

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma17g01854	862	Gene3D	-	797	856	-	-
	Gma17g01854	862	MobiDBLite	consensus disorder prediction	201	251	-	-
	Gma17g01854	862	Gene3D	Phosphorylase Kinase; domain 1	308	417	-	-
	Gma17g01854	862	Pfam	Leucine rich repeat	117	176	IPR001611	GO:0005515
	Gma17g01854	862	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	7	626	-	-
	Gma17g01854	862	MobiDBLite	consensus disorder prediction	232	251	-	-
	Gma17g01854	862	SUPERFAMILY	Nucleotidylyl transferase	669	847	-	-
	Gma17g01854	862	Gene3D	Ribonuclease Inhibitor	188	230	IPR032675	-
	Gma17g01854	862	Gene3D	Transferase(Phosphotransferase) domain 1	418	632	-	-
	Gma17g01854	862	SUPERFAMILY	L domain-like	53	209	-	-
	Gma17g01854	862	PANTHER	LRR RECEPTOR-LIKE KINASE	7	626	-	-
	Gma17g01854	862	Gene3D	Ribonuclease Inhibitor	28	187	IPR032675	-
	Gma17g01854	862	SUPERFAMILY	Protein kinase-like (PK-like)	346	615	IPR011009	-
	Gma17g01854	862	Pfam	Leucine rich repeat N-terminal domain	30	64	IPR013210	-
	Gma17g01854	862	Pfam	tRNA synthetases class I (I, L, M and V)	750	833	IPR002300	GO:0000166\|GO:0004812\|GO:0005524\|GO:0006418
	Gma17g01854	862	ProSitePatterns	Protein kinases ATP-binding region signature.	347	369	IPR017441	GO:0005524
	Gma17g01854	862	Pfam	Protein kinase domain	346	544	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gma17g01854	862	ProSiteProfiles	Protein kinase domain profile.	341	625	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gma17g01854	862	Gene3D	HUPs	736	790	IPR014729	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma17g01854	Gma-Chr17	31761835	31769286	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma17g01854	7	639	Receptor kinase-like Gene Family	AT5G35390	46.119	0.0	545

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Gma17g01854		Pkinase	1.6e-30	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma17g01854	-		-	gmx:100786980	1243.8