Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01851 ATGGAGAGGGTCCTTGGAGGAAAGTTTAAAGTCGGTAAAAAAATTGGGAGCGGATCATTCGGTGAAATTCACATTGGGGCACATATCGAGACTTCTGAAATTGTGGCCATCAAGATGGAGAACAGGAAAACCAATCAGCCACAGCTACAGTTTGAGGCCAAGTTATATAGTACTCTTCAAGGAGGAAGTGGTATTCCAAGAATGAAATGGTGTGGTACTGATGGAGACAGCAATGTTCTTGTTATTGAACTTCTCGGACCGAGTCTTGAAGACCTCTTTTTCTTCTGTGGGAATAAATTTTCACTCAAAACAGTTTTGATGTTGGCTGATCAGTTGCTTACAAGGATAGAGTACTTGCACTCCAAAGGATTTTTGCATAGGGATATCAAACCGGATAACTTCCTTATGGGTCTTGGGAAGAAAGCAAATCAGGTTTATATGATTGATTTTGGACTAGCAAAAGAATATAGGGACCCTTTCACAAATAAGCATATCCCTTACAGAGAGAACAAAGGCTTAACAGGGACTGCACGTTATGCAAGTTACAATGCTCACTCAGGAATTGAGCAAAGTCGTCGAGATGATTTGGAGTCTCTTGGCTATGTTTTAATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTTTGCAAGCTGTCACCAAAAGGCAAAAATATGACAAAATTTGCAAAAAGAAGTTATCAACTCCCATTGAGATACTATGCAAGTCATATCCTGTGGAATTTGCTTCTTACTTTCATTACTGCCGCTCCTTGACATTTGATCAACGGCCAGATTATGGTCTTTTAAAGCGCCTGTTTCGTAATTTGTTCACTCGTGCAGGATATGATTCTGACTATTTATTTGACTGGACCATTCTAAAATATCAACAGATGCAACAGGAAAAGACACAAAGTCAACCACCTGCTCCACTAGCTGTGCCTACCAGTCTTGAACCAGTGGATGAGGATAATCATAAAGGAGTCAATGATTCCATTAAAATTGCTGTGGCAACACCAAAAGTCAATGTTGATCATCAACGTGTTTTTAAGACAACGGCATCTAATGTTCAGAATCTTAATGCCAAGATTCCAGAGAAACATATTGTGAACAATGGTTCATCTGTGCCAACTGCTATGCCCAGAGTTTCCATAGAAAATGCCACAAAACAAGTAAGGCCTGCAGGAACCTCAAATGTGGGTCATGGATTAGGGAATAAGACTGGTGCTTCAGGATGCATTGTTCCTTCACTACGCCGAACTTCGTCAACCAGACAATAG 1278 0.4061 MERVLGGKFKVGKKIGSGSFGEIHIGAHIETSEIVAIKMENRKTNQPQLQFEAKLYSTLQGGSGIPRMKWCGTDGDSNVLVIELLGPSLEDLFFFCGNKFSLKTVLMLADQLLTRIEYLHSKGFLHRDIKPDNFLMGLGKKANQVYMIDFGLAKEYRDPFTNKHIPYRENKGLTGTARYASYNAHSGIEQSRRDDLESLGYVLMYFLRGSLPWQGLQAVTKRQKYDKICKKKLSTPIEILCKSYPVEFASYFHYCRSLTFDQRPDYGLLKRLFRNLFTRAGYDSDYLFDWTILKYQQMQQEKTQSQPPAPLAVPTSLEPVDEDNHKGVNDSIKIAVATPKVNVDHQRVFKTTASNVQNLNAKIPEKHIVNNGSSVPTAMPRVSIENATKQVRPAGTSNVGHGLGNKTGASGCIVPSLRRTSSTRQ 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01851 425 SMART serkin_6 9 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01851 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Gma17g01851 425 MobiDBLite consensus disorder prediction 393 425 - -
Gma17g01851 425 Gene3D Transferase(Phosphotransferase) domain 1 1 335 - -
Gma17g01851 425 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01851 425 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Gma17g01851 425 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 409 - -
Gma17g01851 425 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Gma17g01851 425 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01851 425 PANTHER CASEIN KINASE-RELATED 1 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01851 Gma-Chr17 31406358 31415971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01851 4 236 CBL-interacting serine-threonine protein kinases AT4G14580 27.642 4.43e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Gma17g01851 Pkinase 2.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01851 K08960 - gmx:100782913 863.603