Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01841 ATGAAGTCCTCTGATGCCGCGAACGAGAAGCTCTTAGAAAATGGCACTTCTTCTTCTCAAATCAAAAAAGGTGGCTTGCGAACCATGCCCTTCATCATAGTGAACGAATGTCTGGAGAAAGTTGCGAGTTACGGAATCATGCCCAACATGATATTGTATCTGAGGGACGATTACCTCATGCCTATTGCGAAGGGCACAAGCGTAATTTACACTTGGACTGCCGCATCCGACGTCTTATCCTTATTTGGGGCCTTTCTCTCAGATTCTTACTTGGGTCGATTCCTCGTCATTGCTATCGGTTCCTTCTCCAGCCTTCTTGGTTTAACCATGTTGTGGTTAACTGCCATGTTCCCAGACCTAAAACCTTCCTGTGAATCATACATGCTAGACTGCAACTCTGGTACACCAGCCCAACAAGCTCTTTTGTTCCTTTCTATGGGATTAATTTCTATTGGAGCTGGTTGCGTCAGACCTTGTTCCATAGCCTTTGGAGCAGATCAACTGAACATTAAAGAAAGATCTAATGATGAGAAGCTCTTGGATAGCTACTTTAATTGGTATTATACCTCAATTGCAATATCAACCGTGATTGCACTGAGTGTAATTGTGTACATTCAAGAAAATCTAGGATGGAAAATTGGATTTGGACTACCTGCTTTGCTAATGTTCATATCGGCTGTCAGTTTCATCCTGGGTTTGCCGTTCTATGTCAAAGTGAAGCCAAGTCACAGCTTACTCACTACTTTTGTACAAGTAGCTGTGGTGGCTGTAAAGAACAGAAAACTTAGTCTTCCTGATTCCAACTTTGTTCAGTACTATCAAGACCATGATTCGGAGCTCATGGTCCCTACTGATAGCCTTAGGTGTTTGAACAAAGCTTGCATAAAAATTCCTGAGACAGTCTCGATCTCAAACCCTGATGGATCAGTTTCAGATCCATGGAGCCAATGCACAGTGGAACAGGTTGAGTCACTGAAATCTTTGCTCAGAATCCTACCTATGTGGTCGACGGGCGTTTTAATGATGGTGTCCCAAGGCTCATTCTCTACCCTCCAAGCAAATACCATGGACCGAAGGCTATTTGGAAATTTCAAGATGCCTGCAGGGTCCTTCAATCTTATCATGGTATTGACCTTATCAATAGTCATTCCCTTGTATGACCGCATAATGGTACCTCTACTAGCCAAATACCGGGGCTTGCCTAGAGGATTCGGTTGCAAAACTCGAATCGGGATCGGATTGTTGTTTGTATGCTCAGCTAAGGCGACGTCAGCTGTAGTTGAAACTATGAGGCGAAATGCGGCCATTGAACAAGGCTTTGAGGACCAACCTAATGCTGTAATTGACATGTCGGTTTTATGGCTGTTTCCTGAGTTTGTTTTGCTTGGAATAGGCGAGGCTTTTAACTCGGTTGCGCAGGTTGAGTTTTTCTACACTTGTATCCCCAAGACCATGTCTAGTTTTGCAATGGCTCTTTTCACTCTTGAACTAGCTGCTGCTAATGTAGTGGGGAGTGTGTTAGTGAGCATTGTGGACAAGGTCACTAGTGTAGGAGGGAACGAGAGCTGGATAGCAACTAACATTAACAGGGGACATCTGAATTACTATTATGCACTGCTCACTTGCTTAGGTTTAATTAACTACCTCTACTTTCTTGCTATTAGTTTGGCTTATGGTCCTCCTCCCGGGCAAAAACTTGAAGCTAGAAGAGAAATTTGA 1719 0.4357 MKSSDAANEKLLENGTSSSQIKKGGLRTMPFIIVNECLEKVASYGIMPNMILYLRDDYLMPIAKGTSVIYTWTAASDVLSLFGAFLSDSYLGRFLVIAIGSFSSLLGLTMLWLTAMFPDLKPSCESYMLDCNSGTPAQQALLFLSMGLISIGAGCVRPCSIAFGADQLNIKERSNDEKLLDSYFNWYYTSIAISTVIALSVIVYIQENLGWKIGFGLPALLMFISAVSFILGLPFYVKVKPSHSLLTTFVQVAVVAVKNRKLSLPDSNFVQYYQDHDSELMVPTDSLRCLNKACIKIPETVSISNPDGSVSDPWSQCTVEQVESLKSLLRILPMWSTGVLMMVSQGSFSTLQANTMDRRLFGNFKMPAGSFNLIMVLTLSIVIPLYDRIMVPLLAKYRGLPRGFGCKTRIGIGLLFVCSAKATSAVVETMRRNAAIEQGFEDQPNAVIDMSVLWLFPEFVLLGIGEAFNSVAQVEFFYTCIPKTMSSFAMALFTLELAAANVVGSVLVSIVDKVTSVGGNESWIATNINRGHLNYYYALLTCLGLINYLYFLAISLAYGPPPGQKLEARREI 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01841 572 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 18 563 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma17g01841 572 Pfam POT family 95 524 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma17g01841 572 SUPERFAMILY MFS general substrate transporter 36 554 IPR036259 -
Gma17g01841 572 CDD MFS_NPF1_2 29 558 - -
Gma17g01841 572 PANTHER PROTEIN NRT1/ PTR FAMILY 1.2 18 563 - -
Gma17g01841 572 Gene3D MFS general substrate transporter like domains 2 560 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01841 Gma-Chr17 30292343 30308940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01841 14 569 Organic Solute Cotransporters AT1G52190 49.564 0.0 563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00661 06 5982612 5985411 Gma17g01841 17 30292343 30308940 PCT