Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01829 ATGGTTCTAATTTCTGCAGAGCAATTGAGAGTGAAAGACAAGTCTATAAAAACTATGGCACAAGCTGCACAACAACACTCTCTGTTGGAGGAAGAGCTTAAACAACAAAAGAAAAAGCTCGAGGAATCATCTGAGGGTCAACTAATCTTGGAAGAGCAATTGCTGCAGATGGAATACACCGTACAATATGAAAGAAGTGCAGCtaatAAGACTTCTGGTGCTGAGGGGGAGCGTTTAAAAGAAGCAGCTAACATCAATAAATCATTATCTACCTTGGGTCATGTTATTATGATACTAGTGGATGTGGCAAATGGGAAGCAGAGGCATATCCCTTACAAAGACTCTAGACTAACTTTTCTTCTTCAGGACTCTCTTGGCGAAAACTCAAAAACAATGATCATTGCCAATGTCAGCCCTTCTATCAGGAAGAGCTTTCTATCCTCAAACGACGTCAGAATGTCTCTAGGTCTTTGTCATTTTCTTTGTCATCGATCAGAGATATAA 504 0.3988 MVLISAEQLRVKDKSIKTMAQAAQQHSLLEEELKQQKKKLEESSEGQLILEEQLLQMEYTVQYERSAANKTSGAEGERLKEAANINKSLSTLGHVIMILVDVANGKQRHIPYKDSRLTFLLQDSLGENSKTMIIANVSPSIRKSFLSSNDVRMSLGLCHFLCHRSEI 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01829 167 SMART kinesin_4 6 152 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01829 167 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 68 142 - -
Gma17g01829 167 Gene3D Kinesin motor domain 3 153 IPR036961 -
Gma17g01829 167 ProSiteProfiles Kinesin motor domain profile. 1 167 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01829 167 PANTHER KINESIN-LIKE PROTEIN KIN12B 68 142 - -
Gma17g01829 167 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 142 IPR027417 -
Gma17g01829 167 Pfam Kinesin motor domain 66 142 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01829 167 Coils Coil 19 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01829 Gma-Chr17 29381004 29391756 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01829 70 140 Calmodulin-binding Proteins AT5G65930 54.930 2.30e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01829 K10400 - gmx:100809655 137.887