Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01823 ATGGAAGCAGATATTGTTACTTATAAGTCTACACTGACCAACAAAGAACAAGAAATAAGGGAGCTTCAGATGGAATTGGAAAATTGTTATTATGCCATTGAAGAGAATCACTTGGGACTCTTGATCTTTAAATCTGAACTTGTTGAGGCTTACTCCAAATCATGCAGGGGCAGGGCAGACCTTGATAAAGCATTTGATATCAAAGAGAATGAAGACATGGTTCTAATTTCTGTAGAGCAATTGAGAGTGAAAGACAAGTCTGTAAAAACTATGGCACAAGCTGCACAACAACACTATCTGTTGGAGGAAGAGCTTAAACAACAAAAGAAAAAACTCGAGGAATCATCTGAGGGTCAACTAATCTTGGAAGAGCAACTGCTGCAGATGGAATACACCGTACAATATGAAAGAAATGCAGCATTTGAGGCTCTAGAAAAGACTTCTGGTGCTGAGGGGGAGCGTTTAAAAGAAGCAGCTAACATCAATAAATCATTATCTACCTTGGGTCATGTTATTATGATACTAGTGGATGTGGCAAATGGGAAGCAGAGGCATATCCCTTACAGAGACTCTAGACTAACTTTTCTTCTTCAGGCTGTGGTGAACGAAGATTCTACTGGGGATGTAATTGCTTTACAACATCAAATTCGACTTTTGAAGGAAGAGCTTTCTATCCTCAAACGACGTCAGAATGTCTCTAGGTCTTTGTCATTTTCTTTGTCATCGATCAGAGATATAAAACAATCACTAGAACTCGAAGACTGTTGCCTAGAAAATGCAACTGACATGGTTGACCAACATGAAGATAACATGCCGAATTATGAATCCAAGGGCATCAGAATGTCCCACAAACAGGTATACATGGGTAGGCTTGGCTATGTTAATGAAGGCTAG 894 0.3949 MEADIVTYKSTLTNKEQEIRELQMELENCYYAIEENHLGLLIFKSELVEAYSKSCRGRADLDKAFDIKENEDMVLISVEQLRVKDKSVKTMAQAAQQHYLLEEELKQQKKKLEESSEGQLILEEQLLQMEYTVQYERNAAFEALEKTSGAEGERLKEAANINKSLSTLGHVIMILVDVANGKQRHIPYRDSRLTFLLQAVVNEDSTGDVIALQHQIRLLKEELSILKRRQNVSRSLSFSLSSIRDIKQSLELEDCCLENATDMVDQHEDNMPNYESKGIRMSHKQVYMGRLGYVNEG 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01823 297 PANTHER KINESIN-LIKE PROTEIN KIN-12F ISOFORM X1 146 198 - -
Gma17g01823 297 PANTHER KINESIN-LIKE PROTEIN KIF11 199 286 - -
Gma17g01823 297 Coils Coil 91 115 - -
Gma17g01823 297 Gene3D Kinesin motor domain 63 235 IPR036961 -
Gma17g01823 297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 211 IPR027417 -
Gma17g01823 297 PANTHER KINESIN-LIKE PROTEIN KIN-12F ISOFORM X1 199 286 - -
Gma17g01823 297 Coils Coil 257 277 - -
Gma17g01823 297 Coils Coil 5 32 - -
Gma17g01823 297 ProSiteProfiles Kinesin motor domain profile. 146 198 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01823 297 Coils Coil 209 229 - -
Gma17g01823 297 PANTHER KINESIN-LIKE PROTEIN KIF11 146 198 - -
Gma17g01823 297 SMART kinesin_4 1 203 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01823 297 Pfam Kinesin motor domain 139 211 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01823 Gma-Chr17 29331035 29332510 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01823 113 197 Calmodulin-binding Proteins AT5G65930 40.217 5.09e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01823 K10400 - gmx:100809655 248.44