Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01796 ATGAGGTACATAATAGCCCTTGGTATGGCAAGGGCCATTGCCTACTTACATGAGGAGTGTTTGGAGTGGGTTTTGCACTATGACATCAAGCTAGAGAAAATTCTACTATGTGATGACTTTTGTCCCAAGATATCAGATTTTCGGCTTGCCAAGTTGAGGAAAAAAGAGGACATGGCCACCATGTCTAGGAGGAAGGGCACACTAGGGTACATGGCACTAGAATGGATCACTGCAGACCCAATTACCTCAAAGGCTGATGTGTATAGTTTTGGCATGGTGCTTTTGGAGCTTGTGAGTGGGATTAGGAACTGTGAGATCCAAGGTTTTGTGGTTAGGAGTGAGGAGTGGTACTTCCCTGGTTGGGCCTTTGATAAGATGTTTAAGAAGATGAGAGGGGAGGAGATTTTGGATGGGCAAATTAGGGATGCTTATGATAGTAGGGCACACTTTAAGATGGTTAATAGGATGGTGAAGACTGCAATGTGGTGTTTGCAAGATAGGCCTGAGTTAAGGCCCACTATGGGGAAGGTGGCCAAGATGTTGGAAGGGACTGTGGAGATCACTGAGCCCAAAAAGCCCACTGTTTTCTTCCTTGGTGAAGAGTAG 606 0.4571 MRYIIALGMARAIAYLHEECLEWVLHYDIKLEKILLCDDFCPKISDFRLAKLRKKEDMATMSRRKGTLGYMALEWITADPITSKADVYSFGMVLLELVSGIRNCEIQGFVVRSEEWYFPGWAFDKMFKKMRGEEILDGQIRDAYDSRAHFKMVNRMVKTAMWCLQDRPELRPTMGKVAKMLEGTVEITEPKKPTVFFLGEE 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01796 201 PANTHER OS07G0415500 PROTEIN 1 201 - -
Gma17g01796 201 PANTHER OS10G0101000 PROTEIN 1 201 - -
Gma17g01796 201 SUPERFAMILY Protein kinase-like (PK-like) 2 182 IPR011009 -
Gma17g01796 201 Pfam Protein tyrosine and serine/threonine kinase 5 180 IPR001245 GO:0004672|GO:0006468
Gma17g01796 201 Gene3D Transferase(Phosphotransferase) domain 1 1 194 - -
Gma17g01796 201 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01796 Gma-Chr17 26556451 26557056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01796 3 193 Receptor kinase-like Gene Family AT4G18250 39.394 1.49e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma17g01796 PK_Tyr_Ser-Thr 3.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01796 - - gmx:100775518 374.4