Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01794 ATGTCTTCTGTGGATCTAAAGAAATCTAACAAAATAAGAGAAATTGTTAGACTGAAAGAGATCCTCAAGAAATGGAGAAAAATAGCCAACTCATCAAAAAGCACTACCACTATCGCCACGGCTACCTCTACCACAAGCAAGAGCATGAAGTTTCTCAAGAGAACACTTTCCCTATCAGAACGTGAAGGAGGGTCAAGCAATGTTGTCCCAAAAGGGTACCTAGCTGTTTGTGTTGGTGAAGAGCTCAAGAGGTTCACTATACCAACTGAACATTTGGGTCACCAAGCCTTTCAGATTCTCCTCAGAGAAGCAGAAGAAGAATTCGGCTTTCAGCAAACGGGTGTTCTGAGGATTCCTTGTGAAGTTGCAGCTTTTGAGAGCATCTTGAAGATGGTGGAAGGAAAGGAGGACATGTTTTCATCCCAAGAATGTAGACTTAGCATTGAAGAGATGATGATTGAGTACTGCTCAGAAAACCAACTTGCTTATTCTCACCATCCTCAAAGTCCATTGTGCAGATAG 522 0.4215 MSSVDLKKSNKIREIVRLKEILKKWRKIANSSKSTTTIATATSTTSKSMKFLKRTLSLSEREGGSSNVVPKGYLAVCVGEELKRFTIPTEHLGHQAFQILLREAEEEFGFQQTGVLRIPCEVAAFESILKMVEGKEDMFSSQECRLSIEEMMIEYCSENQLAYSHHPQSPLCR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01794 173 Pfam Auxin responsive protein 24 132 IPR003676 GO:0009733
Gma17g01794 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 173 IPR003676 GO:0009733
Gma17g01794 173 PANTHER SAUR FAMILY PROTEIN 8 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01794 Gma-Chr17 26432424 26433186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01794 4 173 Calmodulin-binding Proteins AT2G24400 51.913 7.64e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01794 K14488 - gmx:100779842 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01794 17 26432424 26433186 Gma14g01268 14 22712278 22712952 GST
Gma04g00712 04 6618566 6619081 Gma17g01794 17 26432424 26433186 PCT
Gma06g00699 06 6355497 6356497 Gma17g01794 17 26432424 26433186 PCT