Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01781 ATGGAGTCCAAGTGGGGCGCCGCCGCCACCAGCATCATAGCGGCAAACTTCGACGACTTCAAGTGGATCGCCTCCATGTTCTATCCCGACGTTGCAAACGACAACGTCAAGCCATGCAAGCTCGATCCTTTCACCGACGAAGCTTTCCAAAACCTGGAGGCAGTAACCGCATCTTCAACATGTGGTGGAGTAACAGAAGATACCCTTGTCCACTCCCAAAACCTCACTCCCATTCAATCCACTATCTCTGCAACTATTGATTCTCTGTCTTCCATTTGTGTTGGGAGCCCATTGTCTGCTAATAAACCAAACGCGAGAGATAATCAAGTAAAAGGGGCCACCACCACTACAAGTGGTTCCTCACGTGAGCCATCTGATGAGGATGATGAAGCAGGTCCTTGTGAACAAAGCACAAACGCTATTGATGTGAAGCGCCTAAGAAGGAAGGTTTCTAATCGAGAGTCTGCAAGGAGGTCCAGGAGGAGAAAACAAGCCCATTTGGCTGACCTGGAGTGGCAAGTCGAACGGTTGAGACTTGAAAACGCAAACCTATTTAAGCAGCTTACAGATGCCAGCCAACAATTTCGTGAAGCTGATACAAATAATCGAGTCCTAAAATCAGATGTCGAAGCTTTGAGAGCTAAGGTGAAATTAGCTGAGGATATGATCACTCGTGGCACACTCACCCCTACCAACAACCAGATTCTTCAAAATCAGAGTCCACTAAACACCCCACCTCAACTCAACACGAATAATTTACGCCGCATGGGATATGTTTCGCCAACCTTCACCGTCCATGGGAATGATGCTACTGCTTCATATGGTGGTGGAATCACAGTTAGTGGACAAAATTCACCGCTTGGTGGGCTTGGAAACTTGGATAATATTCCATGCAGCGATTTCAATAGTGGAGTCAATAGCGATAATGCTGTGAGCTCTATGACTAGCATGTGGCCTTAA 960 0.4708 MESKWGAAATSIIAANFDDFKWIASMFYPDVANDNVKPCKLDPFTDEAFQNLEAVTASSTCGGVTEDTLVHSQNLTPIQSTISATIDSLSSICVGSPLSANKPNARDNQVKGATTTTSGSSREPSDEDDEAGPCEQSTNAIDVKRLRRKVSNRESARRSRRRKQAHLADLEWQVERLRLENANLFKQLTDASQQFREADTNNRVLKSDVEALRAKVKLAEDMITRGTLTPTNNQILQNQSPLNTPPQLNTNNLRRMGYVSPTFTVHGNDATASYGGGITVSGQNSPLGGLGNLDNIPCSDFNSGVNSDNAVSSMTSMWP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01781 319 Coils Coil 202 222 - -
Gma17g01781 319 Coils Coil 160 194 - -
Gma17g01781 319 MobiDBLite consensus disorder prediction 100 121 - -
Gma17g01781 319 CDD bZIP_plant_GBF1 145 196 IPR045314 GO:0003700|GO:0006355
Gma17g01781 319 Gene3D - 143 200 - -
Gma17g01781 319 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 142 205 IPR004827 GO:0003700|GO:0006355
Gma17g01781 319 MobiDBLite consensus disorder prediction 100 136 - -
Gma17g01781 319 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 147 162 IPR004827 GO:0003700|GO:0006355
Gma17g01781 319 PANTHER BASIC LEUCINE ZIPPER 9 34 319 - -
Gma17g01781 319 PANTHER BASIC LEUCINE ZIPPER 63 34 319 - -
Gma17g01781 319 SUPERFAMILY Leucine zipper domain 144 194 IPR046347 GO:0003700|GO:0006355
Gma17g01781 319 Pfam bZIP transcription factor 143 191 IPR004827 GO:0003700|GO:0006355
Gma17g01781 319 SMART brlzneu 140 204 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01781 Gma-Chr17 25283819 25290959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01781 67 319 bZIP Transcription Factor Family AT5G24800 47.692 6.61e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma17g01781 bZIP_1 1.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01781 K25784 - gmx:100776831 615.15