Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01748 ATGGCCTTCGAAAAGATGAATAACCTCAAAAGACTTATCATAGAAAGTGGTAGCTTTACCACAGGTCCCAAACATCTTCCAAATAGTTTAAGAGTATTAGAATGGTGGGACTATCCTTCACCATCTTTACCAATTGATTTTCATCCAAAGAAACTTGTCAAACTAGAGTTACTCGAATTAGCATTTTGCAATTGTGAGAATTTAATTAAAATTCATGAATCGGTTGGATTTCTGGATAAACTTAAAATCTTGTATGCTGATGGCTGCAGCAAGCTTACGAGTTTTCCGCCAATCAAATTGACCTCTCTTGAAGAACTTAAACTTTCATACTGTGGTAGTCTTGAGTGTTTTCCAAAAATATTAGGGAAGATGGAAAATGTAACTTCCCTTGATATTAAAAACACTCCCATCAAAGAATTGCCATCTTCAATTCAAAATCTCACTCAACTTCAAAGGATTAAACTGAAGAATGGTGGAATTATTCAGTTACCAAGTAGCATTTTTGGGATGAAAGAACTTCGTTATTTTATTGTTAAAAAATGTGAGGGGTTGCTACTATCCAAAGAGAACGAAGGGGAAGCACAAATGACCTCAATGGTCTTTAGAAATCCCATTGATTTTCTTGATCTTTCACATTCCAATATATCAGGCGAATTCCTTCTAAGAGGTCTCCCTTTGTTTGCCAATGTGAAAGAATTACACCTAAGAGGGGATGATTTCACAATTCTTCCAGCATGCATTAAAGAACTTCAGTTTTTGAAAGAAATTTATTTCGAAGTTTGTGAGAATCTTAAAAAAATTAGAGGGATTCCACCTAATTTAGAAATACTCTGCGAATTGCATGAGGCCGATGGATACAAATTGTTTCGTTTGCCAGGACCAAGCATTCCAGAGTGGTTTGAGCATTGTATCAATGGATCATCAATTTCTTTCTGGTTTCGTAACAAGTTCCCTGTGATATCTCTATCTTGTGTTTTTGTTGGACTGGAGTTATATGCAGGAGTATGGTTCACACTTATCATCAATGGTAACAAATATTTATCCCCTCATATTTTCTTGGCGGATCTATCCAGTGATCTTCTGTGTATATGTGATCACATTGAGGAACTATTCTACGACCTTGTTCTTTCGGAAAATGAATGGAATCATGTGGTGTGTACTACATCATGGGTACCCCAACCAATCAAACAAATTGGGATCCATGTACTAAAACAAGGAAGCAACATGGAGGACATCCAATTTACGAATCCGCTATTGTTGAAAGAAAAGCGAGATTTTCACAATTTACCAACATGGAGGAAAAAGAAGAGTCTGGTGTTTGTCTCTTCCCGGAATGACTTTTAG 1344 0.3638 MAFEKMNNLKRLIIESGSFTTGPKHLPNSLRVLEWWDYPSPSLPIDFHPKKLVKLELLELAFCNCENLIKIHESVGFLDKLKILYADGCSKLTSFPPIKLTSLEELKLSYCGSLECFPKILGKMENVTSLDIKNTPIKELPSSIQNLTQLQRIKLKNGGIIQLPSSIFGMKELRYFIVKKCEGLLLSKENEGEAQMTSMVFRNPIDFLDLSHSNISGEFLLRGLPLFANVKELHLRGDDFTILPACIKELQFLKEIYFEVCENLKKIRGIPPNLEILCELHEADGYKLFRLPGPSIPEWFEHCINGSSISFWFRNKFPVISLSCVFVGLELYAGVWFTLIINGNKYLSPHIFLADLSSDLLCICDHIEELFYDLVLSENEWNHVVCTTSWVPQPIKQIGIHVLKQGSNMEDIQFTNPLLLKEKRDFHNLPTWRKKKSLVFVSSRNDF 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01748 447 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 387 IPR044974 GO:0006952
Gma17g01748 447 SUPERFAMILY L domain-like 2 277 - -
Gma17g01748 447 Gene3D Ribonuclease Inhibitor 1 112 IPR032675 -
Gma17g01748 447 Gene3D Ribonuclease Inhibitor 113 319 IPR032675 -
Gma17g01748 447 PANTHER ARCHAEAL ATPASE 1 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01748 Gma-Chr17 24247988 24250064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01748 1 319 WRKY Transcription Factor Family AT5G45050 26.571 1.18e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01748 - - gmx:100804616 518.85