Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01734 ATGAGGATTCAAATCAATGAAGCATTTGGACCTGTTGCACCCCTTTTGAGATTCAAAACTGAAGAGGAAGCTATCAGAATTGCTAATGACACTAATGCAGGTAGTTTGGGTTCATATGTATTTACAAACAGTATCCAACGATCATGGCGTGTTGCTGAGGCTCTTGAATATGGACTAGTGGGTGTTAATGAAGGAGTAATTTCAACTGAGGTGGCTCCATTTGGTGGTTTTAAACAGTCTGGCCTTGGAAGAGAAGGCTCCAAATATGGGATGGATGAATATTTAGAGGTAAGGACAAATCTAAAGGGTCCTAGGAGAATGCATTGTGTCATGGATTCCATTCCTGCCACTGCAATTGAAATTGGAGGTGTAGCACCTATACAGACTGTTGGTTAG 396 0.4141 MRIQINEAFGPVAPLLRFKTEEEAIRIANDTNAGSLGSYVFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGFKQSGLGREGSKYGMDEYLEVRTNLKGPRRMHCVMDSIPATAIEIGGVAPIQTVG 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01734 131 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 1 99 - -
Gma17g01734 131 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 1 99 - -
Gma17g01734 131 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 71 IPR016163 GO:0016620
Gma17g01734 131 Pfam Aldehyde dehydrogenase family 1 99 IPR015590 GO:0016491
Gma17g01734 131 SUPERFAMILY ALDH-like 1 103 IPR016161 GO:0016491
Gma17g01734 131 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 72 99 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01734 Gma-Chr17 23701710 23703255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01734 1 108 Aldehyde Dehydrogenase Gene Family AT1G79440 75.000 4.31e-50 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01734 K17761 - gmx:100808318 180.259