LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma17g01721	ATGGAAATACTGGAGAGCCTTTATTCTTACAATTCCCTCCGTCCAAAACTAATAGAACCAAAGGGACAGCTTCTATCAATTGATGGCAAAACAGAGGAGGAGGTTTGTAGGAGTTTAGAGAGAGTGCTCCGTACTATGCGGATAACTACCTCAGAACCCAAGGATGTGGCTTTTGTTGTTGATGGCTGGGCACTTGAGATTGCACTTACCCACTATCGTAAAGCTTTCACTGAGCTGGCAGTTTTGTCAAGGACTGCTATATGTTGTCGTGTGACACCATCACAAAAAGCACAGAAAATAATAGCACTAATTTGCACACTTCAATCGCTCAACTCAACAATCATTGGACACAGCTTCGCGCTCATACTTGCTTCGTTGGGTTTGTTAAGTATTTGTCTGCAATATCACTGGGCTGCTTATGACAATTCAGGCGAATCACTAAATACTGCGGATCATGCTGCATTTGACAACCATACATCATATATGGGAAGTATAAATGGACCCAAGTTACCTCTGGTGTTTGAAGTGCAGCAGATGCCACATGATTTAACTACAGAAGGATGTCCAAAGAACAATTTTCAAAACAGTTGTATATTCAATAAGGCTCCAATTTCAGCAATCACGAATAAGAAAACATACGAGGAAGATACCTGTGTCGACAAGTCAAATCCTCAGCATGAAAGTTTTATCAAGAGATACAGCATCAAGTTGGCATCCACAAGTGCAGACCTCTGGATGGGTATTGTATTGCTCTTCATAGACATTATGATTGCTTTAGAAATACTTGTAAGGCAAGTGCACGGCTGCAAGGCTTCCGGGAGTCAAAGAAAGAGACTAAACAGAACCATGACTGACATTATTGTGCTAATTCCAGTGACAATCTTGATGCTAATTCCTGTAACAGCTGTAGGCCATGCAGCTATTCTAGCAGCTATCAAGAAGTATATGACATTAAATCTTTTGGATATATACTTTTAG	978	0.4059	MEILESLYSYNSLRPKLIEPKGQLLSIDGKTEEEVCRSLERVLRTMRITTSEPKDVAFVVDGWALEIALTHYRKAFTELAVLSRTAICCRVTPSQKAQKIIALICTLQSLNSTIIGHSFALILASLGLLSICLQYHWAAYDNSGESLNTADHAAFDNHTSYMGSINGPKLPLVFEVQQMPHDLTTEGCPKNNFQNSCIFNKAPISAITNKKTYEEDTCVDKSNPQHESFIKRYSIKLASTSADLWMGIVLLFIDIMIALEILVRQVHGCKASGSQRKRLNRTMTDIIVLIPVTILMLIPVTAVGHAAILAAIKKYMTLNLLDIYF	325

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma17g01721	325	PANTHER	LETM1 AND EF-HAND DOMAIN-CONTAINING PROTEIN ANON-60DA ISOFORM 1	113	315	-	-
	Gma17g01721	325	Gene3D	-	14	116	IPR023214	-
	Gma17g01721	325	PANTHER	LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN	113	315	IPR044202	GO:0005743

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma17g01721	Gma-Chr17	23178696	23182084	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma17g01721	19	98	Primary Pumps ATPases	AT5G44240	86.250	1.42e-39	146

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma17g01721	-		-	gmx:100787840	385.185