Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01689 ATGCTTGGTATTGTCGTGCATTACAGCCTTCGGACATTATTTTCTTACTTTCAGGTTTTGTCTGTGACATTGGATGAATGGTCAAGTGATGGAATAGATGCAATGATTGAAATTGGACGAAATTCTTCTGCTAATTCAATATATGAGGCTTATTTTCCAAAAGGATATACAAAACCTGGACCAGATGCTAGTCATGAGCAACGTGCGAAATTCATTCGGGAGAAAGATTCTTTCGGATTAGAAGAACATAGTGGAATAGATCTGAGTGGTAACACTGATGCAGAACATGATATATCCAACAACACTCAAGAAAATGCATGCAAGAAACAAGTGGAAAGTCCTAACAACAACATTGAAGCTGAAGATGTGAAGGAAATTTCACATGTTGTGTACAAGGAGACAGGAAAGGCTTCAAAAGTTGAAGTAAAAGATGTGAAATTGAATCATCCAAAGGAAGTTCAGGTTAACTCTGTGAGTAAGGGTAGCAATGCAGCCAAGACTAAGAACAAATCAATGCTACCTACTTCTAAGGCATCCCCAATTTCAACACCAAAAAGTTCAAAGCCTGCATAA 573 0.3787 MLGIVVHYSLRTLFSYFQVLSVTLDEWSSDGIDAMIEIGRNSSANSIYEAYFPKGYTKPGPDASHEQRAKFIREKDSFGLEEHSGIDLSGNTDAEHDISNNTQENACKKQVESPNNNIEAEDVKEISHVVYKETGKASKVEVKDVKLNHPKEVQVNSVSKGSNAAKTKNKSMLPTSKASPISTPKSSKPA 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01689 190 MobiDBLite consensus disorder prediction 152 190 - -
Gma17g01689 190 Gene3D Arf GTPase activating protein 4 79 IPR038508 -
Gma17g01689 190 SUPERFAMILY ArfGap/RecO-like zinc finger 7 75 IPR037278 -
Gma17g01689 190 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 6 150 IPR044518 GO:0005096|GO:0005543
Gma17g01689 190 MobiDBLite consensus disorder prediction 142 190 - -
Gma17g01689 190 Pfam Putative GTPase activating protein for Arf 14 75 IPR001164 GO:0005096
Gma17g01689 190 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 6 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01689 Gma-Chr17 21803245 21804947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01689 6 75 C2H2 Transcription Factor Family AT4G21160 65.714 1.06e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01689 K12486 - gmx:100810690 182.57