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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gma17g01680
ATGATCCAAGAATTGTTGGGTGGTGCCCTCATAGCAGGAGAAAGAAAACCTTCCTCCATTAATGGAGGAGGTGGAGGAGGAGGAGTTTTACTCCCAATTACTACACCTTCTCCTTCTTCTTTTCCCTCTTCCACGACCAGTGATGTTACCCTCACATCCACAACAACAactgctgctactactgctgctactgctgctactactactactgctgTCGAAAACCTGAGATGTCCTCGATGTGATTCATCGAACACCAAGTTTTGTTACTACAACAACTACAACCTCACTCAGCCGCGGCACTTCTGCAAGACGTGCCGCCGCTACTGGACCAAAGGTGGGGCTCTCCGGAACGTCCCCATCGGAGGCGGATGCCGGAAGAATAAGAGCATTGGCGTGGCGAGCTCGGTGGCGGGGAAGACAGCCTCGACCAAGATGAAAACCATTGCATCGGAGTTTGGAAAATCGCCGGGCTTTGGCGGTGGGTTCGAGGTGGAACACGAACTTCCGCCACCACCGGGCCAAATCCTCTGGGGATCGCCCCAAAACACCCACCTTCTAGCCTTGCTGAGAGCTACACAAACTCAAAACCCTAACCCTAACCCTAGTCCCATGTCCCTCAAGGAAGAAGGAACCCTATTGGGCCACATGGTGAGCACTGATCAGCCCTTGGTTTCAAACACTTTGCTGAGCTACCGAACCTTAGGCTATGATGCTGTTGCGCAAGTTCCTTCTTCGCTTGGTCTGTTTGGGAGAAACAATCAAGATCAACAACAACAAAATGGAGGGTTCCTAGTTGGGGAACATCACAACAACAGTGGAATTCAAGAGCTTTACCAGAAGCTAAGGTCATCATCAACTGTTAATAATAATTATTGCAGTGATAATAACTCGTCACAAATGTTTATGGGGAACATGGCTTCTAACTATTCCTCTTCTGTGTCCAACAACATTTTGGAGACAACCTCGGTTGCTGGGGGTGAATTCGGATACTGGAATGGTCCAACTTTTTCTAATTGGTCTGATCTTCCAACCACTAATGGCGCTGGTGCATATCCGTAA
1059
0.4674
MIQELLGGALIAGERKPSSINGGGGGGGVLLPITTPSPSSFPSSTTSDVTLTSTTTTAATTAATAATTTTAVENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSIGVASSVAGKTASTKMKTIASEFGKSPGFGGGFEVEHELPPPPGQILWGSPQNTHLLALLRATQTQNPNPNPSPMSLKEEGTLLGHMVSTDQPLVSNTLLSYRTLGYDAVAQVPSSLGLFGRNNQDQQQQNGGFLVGEHHNNSGIQELYQKLRSSSTVNNNYCSDNNSSQMFMGNMASNYSSSVSNNILETTSVAGGEFGYWNGPTFSNWSDLPTTNGAGAYP
352
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gma17g01680
352
MobiDBLite
consensus disorder prediction
16
47
-
-
Gma17g01680
352
Pfam
Dof domain, zinc finger
74
129
IPR003851
GO:0003677|GO:0006355
Gma17g01680
352
ProSiteProfiles
Zinc finger Dof-type profile.
75
129
IPR003851
GO:0003677|GO:0006355
Gma17g01680
352
MobiDBLite
consensus disorder prediction
33
47
-
-
Gma17g01680
352
PANTHER
DOF ZINC FINGER PROTEIN DOF1.4-RELATED
10
348
IPR045174
GO:0003700|GO:0006355
Gma17g01680
352
PANTHER
DOF ZINC FINGER PROTEIN DOF5.1-LIKE
10
348
-
-
Gma17g01680
352
ProSitePatterns
Zinc finger Dof-type signature.
77
113
IPR003851
GO:0003677|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Gma17g01680
Gma-Chr17
21126652
21128027
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gma17g01680
60
180
C2C2-Dof Transcription Factor Family
AT1G51700
51.587
4.01e-33
120
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
C2C2-Dof
Gma17g01680
zf-Dof
1e-32
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gma17g01680
-
-
gmx:778108
646.351
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Gma01g01859
01
54145863
54147422
Gma17g01680
17
21126652
21128027
PCT
Gma11g00546
11
4553161
4554807
Gma17g01680
17
21126652
21128027
PCT
Gma17g01680
17
21126652
21128027
Gma01g01859
01
54145863
54147422
PCT
Gma17g01680
17
21126652
21128027
Gma11g00546
11
4553161
4554807
PCT
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