Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01675 ATGGAAGAGACTAAACAGCGTGTTGCTCTTCAAGAGAGATTGAGGATGGTGTCTTCTGAAATTGTTGAAAAAGGTCAAAGCAGTGAAAGCAACAAGCAAATTCTGAGGTCAACCCTTAAGGATAACGCTGCTGTGGTGCAAGAGATCAAGCAATACAACGAGCACTTGAATCCACCCAGAGAAGAAATCAACACCCTTTTTGGAGAAAAAGAAAATGCAGATGAAGAATTTGTTTGTAAATGGTTCTCCAAGTGGTGTCTATCTTTGTTTCTGTGCAGATTTGGGCAGAAGAGGGATGATTCATTTGCTGGTGGTGCTGAGAAGCAAGGTCTTGTGGCAAAAGATATTGAAGAGAAACTTTACAAAATGAGAGAAATTCTTGAGCTTCTGAGCAAAAGGAGTTTTGAGAAGAATCTTGGTGGTTTTGGAACACCTTTGAAGTTTCCTTTTGGTGTTCCAGAAAACCCAAAATTCACTGTTGGGTTGGATGAACCGTTGAGTAAGTTGAAGATTGAGGTTCTTAGAGATGGAGTGTCAGTTGTTCTGCTCACTGGTTTGGGTGGAATGGGGAAAACCACTTTGGCTACTAAGCTATGCTGGGATGAACAAGTTAAGGGTAAATTTGGGGAAAATATTTTATTTGTTACTTTCTCAAAAACGCCCCAGCTGAAGATTATTGTGGAGAGATTATTTGAACACTGTGGATGTCAAGTACCTGATTTTCAAAGTGATGAAGATGCAGCTAATCAATTGGGACTTTTGCTGAGGCAAATTGGTAGAAGTTCAATGTTGTTGGTTGTGGATGATGTTTGGCCTGGCTCAGAAGCCCTTGTCCAGAAATTTAAAGTCCAGATACCAGATTATAAAATATTGGTGACTTCTAGGGTTGCATTTCCTAGTTTTGGCACCCAGTGTATATTAAAACCCCTTGTTCATGAAGATGCAGTAACCCTTTTCCGTCATTGTGCCCTCTTAGAAGAAAGCAATTCAAGCATTCCTGATGAAGAACTTGTACAAAAGGTTGTTAGAATCTGCAAGGGTTTACCACTTGCCATCAAAGTAATTGGGAGATCACTCAGTCATCAGCCTTCTGAGTTGTGGCTAAGGATGGTGGAGGAATTGTCACAGCATTCTATACTTGATTCTAATACTGAACTGCTTACATGCCTCCAAAAGATCTTGAATGTTTTGGAAGATGATCCTGCCATCAAGGAGTGCTTCATGGACCTAGGGTTATTTCCTGAAGACCAAAGAATTTCTGTTACCACTCTCATTGATATGTGGGCAGAGTCGTGTAGTCTAGATGACAATGGTACAGAGGCAATGGCCATCATCAAAAAATTAGACTCCATGAATCTGGCTAATGTCTTGGTAGCAAGGAAAAATGCTAGTGACACAGACAATTACTACTACAGTAACCACTTCATCATCCTTCATGACCTTCTGAGAGAGCTTGCAATTTATCAAAGCACTCAAGAACCAGCGGAAGAGAGAAAAAGATTGATTATTGAGATAAATCAAAATAAACCTCATTGGTGGCTTGGGGAGAAGTCAAAATTGCTTAAGCCCCAACAGGCCACTGCCCAAACATTGTCTATATCAACtgATGAAAATTGCTGTTCAGATTGGCCCCAAATACAACTAGCTCAAGTTGAGGTTCTGATTTTTAATCTTCGAACTAAACAGTATTCCTTTCCAGATTTCATGGAAGAAATGAACAAACTTAAAGTTCTGATTGTCACAAATTACAGTTTCTATCCTTCTGAAATAAACAACTTTGAGCTACTTGGCTCTTTATCCAACCTTAAAAGAATCAGACTAGAGCGGATTTCTGTCCCTTCCTTTGTTGCAATGAAGAATCTTAAAAAGTTATCCCTCTACCTGTGTAATATAAAACAGGCTTTTGAAAACAATGACATGCTAATTTCATACATTTTTCCAAATCTTGAAGAGTTGAATATTGACTATAGCAAAGATATGGTGGGATTGCCTAAGGGGCTCTGTGATATCATCTCCCTAAAGAAGCTCAGTATTACTAATTGCCACAAACTCTCTGCACTGCCGCGAGAATTTGGGAAGTTGGAGAATTTGGAACTCCTAAGGCTGAATTCCTGTACTGATTTGGAAGGGTTACCAGATTCTATTGGAAGGCTTTCAAATCTACGACTTCTTGACATCTCAAATTGCATAAGCCTTCCTAATTTACCAGAGGACTTTGGTAATCTGTTTAACCTACAAAATCTCTACATGACAAGTTGTGCGAGGTGTGAATTGCCACCCTCAATCGCCAATCTTGAGAATTTAAAGGAGGTGGTATGTGATGAAGAGACGGCTGCATCATGGGAAGATTTCAAACCTATGCTTCCCAATCTAAAGATAGATGTTCCTCAAGTTGATGTTAACTTGAATTGGCTTCATACAATTTCCTCCTAA 2433 0.3946 MEETKQRVALQERLRMVSSEIVEKGQSSESNKQILRSTLKDNAAVVQEIKQYNEHLNPPREEINTLFGEKENADEEFVCKWFSKWCLSLFLCRFGQKRDDSFAGGAEKQGLVAKDIEEKLYKMREILELLSKRSFEKNLGGFGTPLKFPFGVPENPKFTVGLDEPLSKLKIEVLRDGVSVVLLTGLGGMGKTTLATKLCWDEQVKGKFGENILFVTFSKTPQLKIIVERLFEHCGCQVPDFQSDEDAANQLGLLLRQIGRSSMLLVVDDVWPGSEALVQKFKVQIPDYKILVTSRVAFPSFGTQCILKPLVHEDAVTLFRHCALLEESNSSIPDEELVQKVVRICKGLPLAIKVIGRSLSHQPSELWLRMVEELSQHSILDSNTELLTCLQKILNVLEDDPAIKECFMDLGLFPEDQRISVTTLIDMWAESCSLDDNGTEAMAIIKKLDSMNLANVLVARKNASDTDNYYYSNHFIILHDLLRELAIYQSTQEPAEERKRLIIEINQNKPHWWLGEKSKLLKPQQATAQTLSISTDENCCSDWPQIQLAQVEVLIFNLRTKQYSFPDFMEEMNKLKVLIVTNYSFYPSEINNFELLGSLSNLKRIRLERISVPSFVAMKNLKKLSLYLCNIKQAFENNDMLISYIFPNLEELNIDYSKDMVGLPKGLCDIISLKKLSITNCHKLSALPREFGKLENLELLRLNSCTDLEGLPDSIGRLSNLRLLDISNCISLPNLPEDFGNLFNLQNLYMTSCARCELPPSIANLENLKEVVCDEETAASWEDFKPMLPNLKIDVPQVDVNLNWLHTISS 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01675 810 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 410 IPR027417 -
Gma17g01675 810 Gene3D - 390 486 IPR036388 -
Gma17g01675 810 Gene3D Ribonuclease Inhibitor 488 789 IPR032675 -
Gma17g01675 810 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 13 796 IPR039203 GO:0050832
Gma17g01675 810 Pfam NB-ARC domain 176 385 IPR002182 GO:0043531
Gma17g01675 810 Gene3D - 146 298 IPR027417 -
Gma17g01675 810 PRINTS Disease resistance protein signature 180 195 - -
Gma17g01675 810 PRINTS Disease resistance protein signature 257 271 - -
Gma17g01675 810 PRINTS Disease resistance protein signature 345 359 - -
Gma17g01675 810 PRINTS Disease resistance protein signature 716 732 - -
Gma17g01675 810 SUPERFAMILY L domain-like 479 777 - -
Gma17g01675 810 Gene3D - 310 389 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01675 Gma-Chr17 20737186 20742140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01675 587 771 Receptor kinase-like Gene Family AT1G28440 29.534 3.56e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01675 - - gmx:100809435 1594.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01675 17 20737186 20742140 Gma05g00841 05 17148294 17154210 GST