Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01674 ATGGCCGAATATAACAATGAAAGTTATGTGAATGATCTGGATCTGCCATTGCTTGATTTGTCAATAATCATTGCCGCCACAAACAAATTCTCAGAGGGAAACAAGATTGGAGAAGGTGGCTTTGGATCTGTATATTGGGGAAAATTAGCCAATGGGCTAGAAATTGCTGTGAAAAGACTCTCAAAGAACTCGGATCAAGGAATTAGTGAGTTTGTAAACGAAGTAAAACTGATTGCAAGAGTTCAACACAGAAATCTTGTAAAGCTTCTTCGCTGTTGCATTCAAAAAAAAGAGAAAATGCTAGTTTAA 309 0.3689 MAEYNNESYVNDLDLPLLDLSIIIAATNKFSEGNKIGEGGFGSVYWGKLANGLEIAVKRLSKNSDQGISEFVNEVKLIARVQHRNLVKLLRCCIQKKEKMLV 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01674 102 ProSiteProfiles Protein kinase domain profile. 30 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01674 102 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 102 - -
Gma17g01674 102 SUPERFAMILY Protein kinase-like (PK-like) 10 102 IPR011009 -
Gma17g01674 102 Pfam Protein tyrosine and serine/threonine kinase 33 102 IPR001245 GO:0004672|GO:0006468
Gma17g01674 102 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
Gma17g01674 102 Gene3D Phosphorylase Kinase; domain 1 4 102 - -
Gma17g01674 102 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 6 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01674 Gma-Chr17 20734873 20735287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01674 6 102 Receptor kinase-like Gene Family AT4G23190 54.639 2.63e-31 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma17g01674 PK_Tyr_Ser-Thr 2.9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01674 - - gmx:100810407 187.193