Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01670 ATGCCACAAAACTTCCTGTATTGTTCAAATTCAGGTTGTGGATCAGGACTTAGCGGTGAGACAATCTCGGAGAATGGACACCATTGGATTGGGCTTGATATTTTAGCATCAATGCTTAATGTTGCGGTGGAGCGAGAGATTGAGGGTGACCTTTTACTTGGTGACATGGGTCAGGGTCTAGGAATTTGTCCTGAAGTTATGGATGGGGCCATCAATATATCTGTTGTTCAGGCTCTTCAAACTGTTGGAAATTCTCTTAACTTCAATCCAAGCAAGGGGAGGATAACCAACAAGAGGGAAGATGGGTATCATGATTTGGCATCCCTTTTTCATGTGATAAGTCTAGGTGACATAATTAAGTTCTCTTTGTCACCTTCAAAAACCAAGGATAGCCTGTCAACCAACGTGTCTGGGGTGCCCCTTGATGATAGAAATTTGGGCTTGGCGGTGGAAGTAGCAATGCTGCAACTGCACTATGGGCAGCAAATCAATTTAGTGGTTGTCCTGCCTCTGAGAAAGAACTCCAAGAATGGTCAAGTGAGATTGGATCAGATATTCCCTTCTTTTTCTCTCAGGGAGCAGCCTATTACACTGGTCGAGGAGAGGTTAGTCCAAACATTAGGTTGTTCAGAATATTCCTCCACCAGTATCTCTAGATGTTCCAATGGTTCTCATAAAGCCCCCAGAAGCATGTTCAACTGCCGAAGTCTACAAGTTGTGCTTATAGTTTTGGTCATTGCTCTGTATCCAGCCAAGGGAAGTAAAGCAGTTGCTGAATCTGGACGAGCCACCCCAGAAATTCCTTCATCGCCAAACACAATGAAGGAACTGGGCGTGGTTGCAATCCTGTTGCCAATAGAGTTCTTTGACGTGATCGTCTACACTATAAGCAAAGCAGCCATGAAGAAGGGCATGAATGACTCTGTGTTCAGATGCTCAGGGGCAGTGTTGCTTGCGGGTCATAGCTTTGTTCTCTCATTGTTGTTCATAGTTCAGACATGGATAATCAGAAATTACCCTACAGAGCTTGTGATAGTGCTCACTCGCAGTACATTAGTTGCTATGCTATCTATCCCACCTTCACTGATTTCGGTAACAGATCCAAAAGCTTTGAGATTAGGATTTGATGTGAATTTGATAGCTATTGCATTCCAAGCAATTTTTGGTGTATCCCTTCGAAGTATTGTTCATATATGGGTCATGAGCAAGAAGGGCCCTCTCTATGTTGCAATGGTTAAGTCAATTGGAATCATCTTTGCGGTCATCATGGGAATTGCATTTCTTGGTGACTCTATCTATCTTGGAAGGCATACGTTTCTTTCATGTCTTAATCATATGAAAAATTGGAGTGTGCTTGGAGCAGCCATTATTTGGGGGAAAAGCCAAGAGCAAGCAAAGGAAGAGTGTGAAGTCTATGATGACTCGGAATCATACTCACCCGTTGTCCCTCTTTTGAAGAACAAGAGAATGGAGGAATAG 1479 0.4327 MPQNFLYCSNSGCGSGLSGETISENGHHWIGLDILASMLNVAVEREIEGDLLLGDMGQGLGICPEVMDGAINISVVQALQTVGNSLNFNPSKGRITNKREDGYHDLASLFHVISLGDIIKFSLSPSKTKDSLSTNVSGVPLDDRNLGLAVEVAMLQLHYGQQINLVVVLPLRKNSKNGQVRLDQIFPSFSLREQPITLVEERLVQTLGCSEYSSTSISRCSNGSHKAPRSMFNCRSLQVVLIVLVIALYPAKGSKAVAESGRATPEIPSSPNTMKELGVVAILLPIEFFDVIVYTISKAAMKKGMNDSVFRCSGAVLLAGHSFVLSLLFIVQTWIIRNYPTELVIVLTRSTLVAMLSIPPSLISVTDPKALRLGFDVNLIAIAFQAIFGVSLRSIVHIWVMSKKGPLYVAMVKSIGIIFAVIMGIAFLGDSIYLGRHTFLSCLNHMKNWSVLGAAIIWGKSQEQAKEECEVYDDSESYSPVVPLLKNKRMEE 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01670 492 PANTHER WAT1-RELATED PROTEIN 312 462 - -
Gma17g01670 492 PANTHER WAT1-RELATED PROTEIN 312 462 IPR030184 GO:0016021|GO:0022857
Gma17g01670 492 Gene3D - 95 178 IPR014721 -
Gma17g01670 492 Gene3D Vaccinia Virus protein VP39 11 94 IPR029063 -
Gma17g01670 492 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 79 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01670 Gma-Chr17 20613369 20619440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01670 314 492 Nodulin-like Gene Family AT3G28050 32.828 7.05e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01670 - - gmx:100807495 352.443