Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01668 ATGCCACTGAGACGAAAACCTAAAAAGTTAGCCTCAAAAGTGGACAGTGCCATAAGGAGTGAGAGTGAGACTTGGTCAAATTTGGGAGCATCCCACCTCCATAGTTTTGCTTCTGTAGTGGACTGGGCTATAAGGAGTAGCAGGACTGTGTCGAATTTGGGAACATCACCTGTCCCTAGTTTTGCTTCGGCAGAGGACAATAATGCGATGAGGGTTGTTCCTGCACGATTATTCACCTGGGCTGAGCTTGTAGCAGCCACCAACAATTTCTCAATTCACAACCAGATTGGTGCTGGCTGTTTCAGTGTTGTGTACAGAGGTAAACTTGTCGATGGTCGTGAGGTTGCAATCAAGACGGGTGGAACCTGGCCAAAGAGAGAGAGCAAATTGACCTTGTTATCCGGTTTACACCACAAGAACTTGATTAGGCTGGTTGGATTCTGTGAAACGAATTATGAAAGACTCAGTGTGTATGAGTACATGAAGAATGGGTCCTTGTATGATCGTTTGCATGACAAGGGTAGCAGTGTCTTGAATTCGTGGAAAATGAGGATCAAAATTGCTTTGGATGCCTCTCGAGGAATAGAATATCTTCATAATTATGCAGATTCATTTATTATTCACGGAGATATCAAGTCTTCCAACATTCTTCTTGATGCCACCTGGACGGCAAGAGTATCTGATTTTGGATGGAAGTTTATGAGAAACAGACGACGTATAATTGAGAACACTGATCCTGAGTACGTTATTCGAGGTGCATTGTCAGCAGAGAGTGATGTGCATGGGCTTGGAGTTGTACTGTTTGAACTTCTAACAGGAAAGAGACCTACATTCGTGTACGGGGAAGATGGAGGCACCCTATTAAGTAGAAAACATTTGGTAGACTTTGCTGTGACTGCTATTTCAAATGGATTTTTGGAGAAAATTTTGGATCAAAGGGCTGGACAACCCGATGTGAATGAAACAGAAGCAGTAAAGTTAGTGGCTGATACCGCTATCCGTTATGTGAATTTGAAACTGAAAGATAGACCAACCATGGCTGACATTGTAGTCAGATTAGAGCGGGCTTTGGCTATTTTTGAATATGATAGCATTTTCAGGGCTTTGGTTTCGAATTGTTAA 1122 0.4269 MPLRRKPKKLASKVDSAIRSESETWSNLGASHLHSFASVVDWAIRSSRTVSNLGTSPVPSFASAEDNNAMRVVPARLFTWAELVAATNNFSIHNQIGAGCFSVVYRGKLVDGREVAIKTGGTWPKRESKLTLLSGLHHKNLIRLVGFCETNYERLSVYEYMKNGSLYDRLHDKGSSVLNSWKMRIKIALDASRGIEYLHNYADSFIIHGDIKSSNILLDATWTARVSDFGWKFMRNRRRIIENTDPEYVIRGALSAESDVHGLGVVLFELLTGKRPTFVYGEDGGTLLSRKHLVDFAVTAISNGFLEKILDQRAGQPDVNETEAVKLVADTAIRYVNLKLKDRPTMADIVVRLERALAIFEYDSIFRALVSNC 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01668 373 Pfam Protein tyrosine and serine/threonine kinase 91 351 IPR001245 GO:0004672|GO:0006468
Gma17g01668 373 Gene3D Phosphorylase Kinase; domain 1 61 160 - -
Gma17g01668 373 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 20 364 - -
Gma17g01668 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Gma17g01668 373 ProSiteProfiles Protein kinase domain profile. 90 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01668 373 SUPERFAMILY Protein kinase-like (PK-like) 70 353 IPR011009 -
Gma17g01668 373 Gene3D Transferase(Phosphotransferase) domain 1 161 364 - -
Gma17g01668 373 ProSitePatterns Protein kinases ATP-binding region signature. 96 118 IPR017441 GO:0005524
Gma17g01668 373 SMART serkin_6 90 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01668 373 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 20 364 IPR044815 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01668 Gma-Chr17 20562142 20563433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01668 75 357 Receptor kinase-like Gene Family AT3G55950 53.312 1.73e-86 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gma17g01668 PK_Tyr_Ser-Thr 8.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01668 - - gmx:106796655 736.102