Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01667 ATGGAAGAGACGGCACAACAAGTAAAACGTCCTTTTGATGTTCCTGAAGAACCAGAATTCATTGTTGGGTTGGATGCACCATTGAGTGAGTTGAAAATGGAACTTCTTAAAGAAGGCGTGTCCATCATTGTGCTGACTGGTTTAGGTGGATCGGGAAAAACCACTTTGGTTACAAAGCTTTGTTGGGATGAACTAGTCATAGGTAAATTCAAGGGAAATATTTTATTTGTCACCATCTCAAAAACGCCTAAGCTGAAGATTATCATCGAAAGACTATTTGAATATTATGGGTGTCAAGTGCCTGCGTTTCAAAGCGATGAAGATGCAGTTAATCATTTGGGAATTTTGCTGAGGAAAATTGATGTAAGTCCAATGTTGTTGGTCTTGGATGATGTTTGGCCTGGCTCAGAAGGCTTCATTGAGAAAGTCAAAGTTCAGATATCAGATTATAAAATTTTGGTGACTTCAAGGGTAGCATTTCCTAGATTTGGCACTCCATTTATCTTAAAAAATCTTGTTCATGAAGATGCAATGACCCTTTTTCGTCACCATGCACTCTTAGAAAAAAACAGCTCAAATATTCCTGAAGAAGTTGTCCAAAAGATTGTTAGACATTGTAAGGGTTTAAATTTACCGCTTGTCATAAAAGTGATTGGTAGATCACTAAGTAATCGACCATACGAGTTGTGGCAAAAGATGGTGGAGCAATTGTCACAAGGTCATTCTATACTTGATTCTAACACTGAATTACTTACTTCCTTCCAAAAGATCTTAGATGTCTTGGAAGATAATCCCACCATCAAAGAGTGCTTCATGGACTTAGCTTTATTTCCTGAAGACCAAAGAATTCCTGTTGCTGCTCTTGTTGATATGTGGGTTGAGTTGTATGGACTAGATAATGACGGCATAGAAACAGTGGCCATTGTCAACAAATTAGCTTCCATGAATCTGGTTAATGTCTTAGTAACAAGGAAAAATACCAGTGACACAGACAGTTACTACTACAATAACCATTTCATCATCCTTCATGATATCCTAAGAGACTTCGGAATTCATCAAAGCAACCAGGAACAAGTTGAACAGAGAAAAAGACTGATGATTGACATAACAGAAAATAAACCTGAATGGTGGCCTAGAGAAAAACAGATCCCTGCACAGACATTGTCTATATCAACTGATGAAACTTGCACATCATATTCGTCCCACCTGCAACCTGCTCAAGCTGAGGTTCTGATTTTAAACCTTCAAACTAATCAGTGCACCTTTCCAAAGTTACTGAAAGAAATGAGGAAACTAAAAGTTCTGATAGTCATGCATTATGGTTTCCATCCTTCTAAAATGAACAATTTAGAGTTGTTTGGCTCATTATCCCACCTTAAAAGAATCAGATTCGAGCGGATTTGGGTTCCTCCCTTTGTCACATTGAAGAATCTTAAAAAGTTATCCCTCTACTTGTGTAATACAAGACAGGCTTTTGGAAACAGAAACATGCTAATTTCATATGCTTTTCCAAATCTAGTAGATTTGAATGTTGACTATTGCAAAGATTTGGTAGAATTGCCTAAGGGGCTATGTGATATCACCACCTTGAAGATGCTCAGTATTACCAATTGCCATAAGCTCTCTGCATTACCTCAAGAAATTGGAAACTTGGACAATTTGAAACTTCGAAGGCTAAGTTCTTGTACTGATTTGGAAGAGATACCAAATTCTATTGGAAAACTTTCAAATCTAAGACATATGGACATCTCAAACTGCATTAACCTTCCAAATTTACCAGAGAACTTTGGTAATCTTTGCAATCTAAGAAATCTGTACATGACAAGTTGTGCAAGGTGTGAATTGCCACCCTCGATTGTCAATCTAAAGAATTTAAAGGAGGTGGTATGTGATGAAGAGACGACTGTTTCGTGGGAAGCTTTCAAAGATATGCTTCCTAATCTGAAGATATATGTTCCTCAAATTGATGTCAACTTGAATTGGCTTCATGAAATTCACTCCTAA 2004 0.3733 MEETAQQVKRPFDVPEEPEFIVGLDAPLSELKMELLKEGVSIIVLTGLGGSGKTTLVTKLCWDELVIGKFKGNILFVTISKTPKLKIIIERLFEYYGCQVPAFQSDEDAVNHLGILLRKIDVSPMLLVLDDVWPGSEGFIEKVKVQISDYKILVTSRVAFPRFGTPFILKNLVHEDAMTLFRHHALLEKNSSNIPEEVVQKIVRHCKGLNLPLVIKVIGRSLSNRPYELWQKMVEQLSQGHSILDSNTELLTSFQKILDVLEDNPTIKECFMDLALFPEDQRIPVAALVDMWVELYGLDNDGIETVAIVNKLASMNLVNVLVTRKNTSDTDSYYYNNHFIILHDILRDFGIHQSNQEQVEQRKRLMIDITENKPEWWPREKQIPAQTLSISTDETCTSYSSHLQPAQAEVLILNLQTNQCTFPKLLKEMRKLKVLIVMHYGFHPSKMNNLELFGSLSHLKRIRFERIWVPPFVTLKNLKKLSLYLCNTRQAFGNRNMLISYAFPNLVDLNVDYCKDLVELPKGLCDITTLKMLSITNCHKLSALPQEIGNLDNLKLRRLSSCTDLEEIPNSIGKLSNLRHMDISNCINLPNLPENFGNLCNLRNLYMTSCARCELPPSIVNLKNLKEVVCDEETTVSWEAFKDMLPNLKIYVPQIDVNLNWLHEIHS 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01667 667 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 17 653 IPR039203 GO:0050832
Gma17g01667 667 Gene3D - 171 256 IPR042197 -
Gma17g01667 667 Gene3D Ribonuclease Inhibitor 380 666 IPR032675 -
Gma17g01667 667 Gene3D - 1 160 IPR027417 -
Gma17g01667 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 274 IPR027417 -
Gma17g01667 667 Pfam NB-ARC domain 28 242 IPR002182 GO:0043531
Gma17g01667 667 Gene3D - 257 353 IPR036388 -
Gma17g01667 667 PRINTS Disease resistance protein signature 42 57 - -
Gma17g01667 667 PRINTS Disease resistance protein signature 119 133 - -
Gma17g01667 667 PRINTS Disease resistance protein signature 208 222 - -
Gma17g01667 667 PRINTS Disease resistance protein signature 573 589 - -
Gma17g01667 667 SUPERFAMILY RNI-like 413 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01667 Gma-Chr17 20541184 20546064 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01667 475 628 Receptor kinase-like Gene Family AT1G28440 29.940 3.35e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01667 - - gmx:100805367 1333.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01667 17 20541184 20546064 Gma05g00844 05 17452968 17458092 GST
Gma01g01863 01 54167932 54172640 Gma17g01667 17 20541184 20546064 PCT
Gma11g00542 11 4521846 4526739 Gma17g01667 17 20541184 20546064 PCT
Gma17g01667 17 20541184 20546064 Gma01g01863 01 54167932 54172640 PCT
Gma17g01667 17 20541184 20546064 Gma11g00542 11 4521846 4526739 PCT