Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01662 ATGCCTAAAGTTGATGAAGAAACTGGTAAGGTTTCATATGAAGTTGAATCAATAGATGAGGCATCTTTTGTGATTACAGCCAGGGAACTTGGATTTGAATTTTATGAAAGGATACATACAACTATTTCACTTCGTGAATTAGACACCATATTAGGCCAGAAAATCAACAAGTCCTACAAACTTTTGAATATATTAGAGTTTACTAGTGCAAGAAAGCAGATGTCTGTAATTGTGAAAGATGTGGATGGGAAACTACTATTACTTAGCAAAGGGACTGACAGGGTAATGTTTGAACGAATTGCAAAAAATGGAAGGGATTTTGAAGAGAAGACAAAGCAACACATTAGTGAATATACTGATTCTGGTTTGAGGGCCTTGATACTTGGATATCGTGAACTTATTGATGATGAGTACAATAAATTTAATAAAGATTTTATAGAGGCCAAGAACTTAGTAAGTGAAGACCAAGAGTAG 474 0.3439 MPKVDEETGKVSYEVESIDEASFVITARELGFEFYERIHTTISLRELDTILGQKINKSYKLLNILEFTSARKQMSVIVKDVDGKLLLLSKGTDRVMFERIAKNGRDFEEKTKQHISEYTDSGLRALILGYRELIDDEYNKFNKDFIEAKNLVSEDQE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01662 157 Pfam Cation transport ATPase (P-type) 13 99 - -
Gma17g01662 157 Gene3D - 1 154 IPR023299 GO:0000166
Gma17g01662 157 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 157 - -
Gma17g01662 157 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 42 141 IPR023299 GO:0000166
Gma17g01662 157 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01662 Gma-Chr17 19887642 19888115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01662 1 157 Primary Pumps ATPases AT3G25610 62.420 6.37e-64 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01662 K01530 K14802 gmx:100799312 265.003