Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01658 ATGGCTCAAGAAGCCCAGAAGTTCCTCAGCTGGATGAAAAATAAACATGGTGGAAAACTAGACAACAGACTCCCATTGGTGAAGAGCATAAATGTTAGTGGTCACAAGTATGGGCTTGTTTATGCTGGCATTGGTTGGGTTATTTGGAGGACCAAGGATGACTTACCAGAAGACCTTGTCTTCCATATTAATTACCTTGGAGCTGACCAACCCACCTTCACCCTTAATTTCTCTAAAGGTGATTTGATTCATTACAAAGGTCCAAAACTGGCTGGCAACCCATGTCAAGGAATTGGGGGCAAAATTGGCAGAGAAAATCATACCTGTGATGGCAGAACTGTGACAACCTTCAATGTGGCACTAGCCAATTCACAATTTAAAGTGAGGGCACCTGTCAGTTATGTGAGGGCGACCATGATCAACATAATCGCAGAAATTACTACCTAA 447 0.4295 MAQEAQKFLSWMKNKHGGKLDNRLPLVKSINVSGHKYGLVYAGIGWVIWRTKDDLPEDLVFHINYLGADQPTFTLNFSKGDLIHYKGPKLAGNPCQGIGGKIGRENHTCDGRTVTTFNVALANSQFKVRAPVSYVRATMINIIAEITT 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01658 148 Gene3D - 5 87 IPR015421 GO:0003824
Gma17g01658 148 SUPERFAMILY PLP-dependent transferases 17 80 IPR015424 -
Gma17g01658 148 PANTHER GLUTAMATE DECARBOXYLASE 5-RELATED 20 81 - -
Gma17g01658 148 PANTHER GLUTAMATE DECARBOXYLASE 20 81 IPR010107 GO:0004351|GO:0006536|GO:0030170
Gma17g01658 148 Pfam Pyridoxal-dependent decarboxylase conserved domain 18 80 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01658 Gma-Chr17 19815422 19817384 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01658 21 80 Calmodulin-binding Proteins AT5G17330 91.667 1.65e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01658 K01580 - gmx:100812201 127.102