Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01655 ATGTCAACATGCGGCGCATGCAAGTACCAACGGCGAAGGTGCTATTCGGATATTTGCATGTTCGCACCATACTTTCCAGCGGAGAACATCCAGCGGTTCGCGTGCGTGCACCATGTGTTTGGCGGTGGCAACGTAGGAAGCATGCTCAACATCACAAAGCCAAAGTTGCGGGGGTGGGTGGTGAAGACGTTGGCATACCAGGCAGAGGCACGTGTGAGGGACCCTGTGCATGGGTGCGTGGGCCTCATACGGGAGTTGGAAGAGAATCATCGCAAGGTGAAAGAGGACCTTGCCAAGGCCCAAATGGAGCTGGCCCGATACATGGGCCCGGAGTTTGTGAGAAAGCTGAGTCCCAATTATGGTGGTGAGTCTTCTTTGAAGGGTAAGTTTGTGGCACATTTGCAGCCGACAACAATGGAGCTTGACTTTGCTCCCTCTATTGCCATTGATGTTGATGATCTTGATAAGTGGGACCCTTTTCCACCATGGGAAACTAGTTTTCAGAATGTTGGTCCTTCTTCTTCACATGCACATGGTGAAGGTGGGAATAGGAAGGGTAAGGGTGTTGCTCCTTAA 576 0.5156 MSTCGACKYQRRRCYSDICMFAPYFPAENIQRFACVHHVFGGGNVGSMLNITKPKLRGWVVKTLAYQAEARVRDPVHGCVGLIRELEENHRKVKEDLAKAQMELARYMGPEFVRKLSPNYGGESSLKGKFVAHLQPTTMELDFAPSIAIDVDDLDKWDPFPPWETSFQNVGPSSSHAHGEGGNRKGKGVAP 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01655 191 Pfam Lateral organ boundaries (LOB) domain 4 101 IPR004883 -
Gma17g01655 191 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 2 123 - -
Gma17g01655 191 Coils Coil 83 103 - -
Gma17g01655 191 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 123 - -
Gma17g01655 191 MobiDBLite consensus disorder prediction 162 191 - -
Gma17g01655 191 ProSiteProfiles LOB domain profile. 2 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01655 Gma-Chr17 19763166 19763741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01655 2 113 AS2 family AT2G23660 49.107 2.23e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma17g01655 LOB 7.1e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01655 17 19763166 19763741 Gma01g01868 01 54227144 54229868 PCT
Gma17g01655 17 19763166 19763741 Gma11g00537 11 4476184 4481366 PCT