Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01650 ATGCTCTCAGAGTTCTCCGAAATGCAAGGACAACTTGAAGTTTTTTTTCAAGAGCAATCTAATTTGCTAGATACAATAAGGCAGTTAGAGTGCACTATTTTAGAGGTGAAGGTAGTTGAAGGCCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGAGAACAAATAGTTGTCTGCGGAATGCAGGGTCCAATTGTTACCACAATTCGAGCTTTATTGACAATTCACTTGCTATTTGAATTTTAA 261 0.364 MLSEFSEMQGQLEVFFQEQSNLLDTIRQLECTILEVKVVEGHGTTIDVVLVNGVLHEGEQIVVCGMQGPIVTTIRALLTIHLLFEF 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01650 86 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 24 83 IPR015760 -
Gma17g01650 86 SUPERFAMILY Translation proteins 28 80 IPR009000 -
Gma17g01650 86 Gene3D Translation factors 24 86 - -
Gma17g01650 86 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5B 24 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01650 Gma-Chr17 19591806 19593049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01650 23 86 Eukaryotic Initiation Factors Gene Family AT1G76810 73.438 1.32e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01650 K03243 - gmx:100814640 103.99