Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01644 ATGGAAGCGAAGTTTAAGAGGCTAAAAAGAGACTTTGACAGTCAGAGAAAGAAGCTGACGGAAACAAGGAGGGAGTTGGGGGAGATCAAGAGAGAGAATCAACAGAAGAGTAGAGAATGCCAAGAAGCTTGGAACTCCTTGAAAGAGCTTCAAAATGAGCTAATGTGCAAGTCCATGCATGTAGGATCTTTGGCATTTGCCATTGAGGGGCAAGTGAAGGACAAAAGTAAGTGGTTTTCATCACTAAGAAACTTCACGAGGAAATTGAAGATTATGAAAATGGAACACATCAAGCTATTAGAGGAAGCAGAGGCAAGCAAAAAATATCAAGCAGATATGAGAGAAATGGGGCTTATTATTAAGTCCAAAATAAATGAACAGCTGGAGTCACATGAAGATCTCAAGTCCAAATATATTGAAGGGGCTACGGAACGGAAAGATCTTTACAATAAGGTTTTGGAGTTGAGAGGAAACATAAGGGTCTTTTGCCATTGTAGGTCTTTCAACACCAACGAGATATATGCAGGAGCAACAATGGCCTTAGATTTTGAATCTATGAAAGATGGTGATTTAACTATAATGTCAAATGGAGCTCCTAAGAAGACTTTCAAGTTTGATGTTGTCTTTGGTCCCCAAGCTGAGCAAGCTGATATTTTTAAAGACACAACACCATTTGCAACCTCGGTTCTAGAAGGGTTCAATGTATGTATTTTTGCATATGGTCAGACTGGGACAGGAAAAACTTTCACAATAGAGGGCACAAAAGAGGCTCAGGGTGTTAATTTCAGGACTCTTGAGAAAATGTTTGACATAATCAAGGAGAGGCATAAGCTCTACTGTTATAATATTTCTGTAAGTGTCTTAGAAGTGTACAATGAGCAAATAAGAGATTTGCTGGTTGCAGGAAATCATCCAGGAACAACTGCAAAAAGCTTATTCTATAAGTTTTTCAGAATAGTAACTGATATAGTCACTAAAATGTGGTTAATTGTAGACTTGAGATACGATAAGCTGGCACATGTGAACAATATGACTGAAGTTTGGGAAGTCCTACAAACCGGTAGCAATGCGAGGGCAGGGGAGAATTTGTTGAATGGGGAATGCACGAGAAGCAAGTTATGGCTGATGGACCTAGTAGGCAGTGAGCGAGTGGCAAAGACAGAAGTGCATGGTGATGGACTAAAGGAGACACAAAATATTAATAGGTCTCTCTCTGCACTTGGTGATGTCATATCAGCTCTTGCAACAAAAAGTTCACACATTCCTTTCAGGAACTCCAAGCTTACACACTTACTACAAGACTCATTAGGAGGAGACTCAAAGGCACTCATGTTTGTACAGATCAGTCCTAATGAAAATTATTTGAGTGAGACAATTTGCTCTCTGAACTTTGCTAGTAGAGTAAGAGGAATAGAATTGGGACCAGCAAGAAAGCAGTTAGACACTGTTGAACTTTTGAGACACAAACAAATGGTTGAGAAAGTCAAACAAGAGGTAAGGCTGAAAGATTTGCAAATCAAGAAGCTGGAGGAAACAATCCATGGATTGGAGTCCAAGATGAAGGAAAGAGACAGTAAGAACAAAAATCTCCAAGAGAAGCGTCTTACAGAGGAATTTGTACCCCATGTAGATTTACTTCTTTTTGTCATTTCTGTTGATCACCCTTTAACTGGAAGTGAGGTATGGTCAGTCTATTATGCACCAATTTTAGCTGCCTTCAGTGTTCCTCTTGCTCAAAGTGATGATGAAATTGTAATAGCATTGTGTCCAAAAAGGCTTCCCTTATGCTATTCATGTTACTACTGTAATGTCCATGAAGACTCACAGCCAGAGATGTCTTTGTGA 1845 0.3951 MEAKFKRLKRDFDSQRKKLTETRRELGEIKRENQQKSRECQEAWNSLKELQNELMCKSMHVGSLAFAIEGQVKDKSKWFSSLRNFTRKLKIMKMEHIKLLEEAEASKKYQADMREMGLIIKSKINEQLESHEDLKSKYIEGATERKDLYNKVLELRGNIRVFCHCRSFNTNEIYAGATMALDFESMKDGDLTIMSNGAPKKTFKFDVVFGPQAEQADIFKDTTPFATSVLEGFNVCIFAYGQTGTGKTFTIEGTKEAQGVNFRTLEKMFDIIKERHKLYCYNISVSVLEVYNEQIRDLLVAGNHPGTTAKSLFYKFFRIVTDIVTKMWLIVDLRYDKLAHVNNMTEVWEVLQTGSNARAGENLLNGECTRSKLWLMDLVGSERVAKTEVHGDGLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKALMFVQISPNENYLSETICSLNFASRVRGIELGPARKQLDTVELLRHKQMVEKVKQEVRLKDLQIKKLEETIHGLESKMKERDSKNKNLQEKRLTEEFVPHVDLLLFVISVDHPLTGSEVWSVYYAPILAAFSVPLAQSDDEIVIALCPKRLPLCYSCYYCNVHEDSQPEMSL 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01644 614 ProSiteProfiles Kinesin motor domain profile. 158 471 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01644 614 PANTHER KINESIN-LIKE PROTEIN KIN-14Q 2 532 - -
Gma17g01644 614 Coils Coil 492 533 - -
Gma17g01644 614 Gene3D Kinesin motor domain 100 362 IPR036961 -
Gma17g01644 614 Gene3D Kinesin motor domain 363 514 IPR036961 -
Gma17g01644 614 SMART kinesin_4 156 479 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01644 614 Pfam Microtubule binding 141 299 IPR031852 GO:0008017
Gma17g01644 614 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 532 - -
Gma17g01644 614 PRINTS Kinesin heavy chain signature 232 253 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01644 614 PRINTS Kinesin heavy chain signature 372 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01644 614 PRINTS Kinesin heavy chain signature 421 442 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01644 614 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 509 IPR027417 -
Gma17g01644 614 Coils Coil 5 53 - -
Gma17g01644 614 Pfam Kinesin motor domain 368 471 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01644 Gma-Chr17 19517028 19520600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01644 138 499 Calmodulin-binding Proteins AT5G65930 36.364 2.03e-60 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01644 K10406 - gmx:100779622 921.383