Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01620 ATGAGGTATGGCGAGACGAGCGCGTGGCAGTGGCGCTTCAGGAGGCAGAGTGTGAAGTTGCACCTCTCCTCGAGGGAGTCCTTCACATCTCCACGTGGTGCGTCCACAAGACGTGGTTGCCGCAGAAGGCGTTGTGGACGATGTGATTTGACGCAACAACGAAGGAGACACGGTTTAAGGATGGCAAGCGGGGGAGAGTTAATCGACAGCACATGGCGACAGGGGCTTAGTTCGAGGCATTGCCTCTATTCGAAGAAACCTCTTGGTTGTGGTAAAACACTGATTGCCAAAGCTATTGCCAATGAGACAGGGGCTGATTTTATTCATATTAAGATAAGAGATGGAAAAATTAAAGTTCTTACTCCTAGGGAAGCTAGGTATGCAGTTCAGCTTTCAAACAAGCCCCTTCTTGATGTTTGTCCCTCAAATGGACACAAAAAGTTAGCTAAACAAGTTTATAAGGCGTCTAAGATAGTAGCAACTGCTAGCACTGAGAAACTTCAACTTTTAAGGGAGTTGGGAGTTGACTTGCCTATTGATTACACAAAGGAGAACTTTGAAGGTCTTCCAGAAAAATACAATCTAGTGTATGATGCATTAGGTTAG 606 0.4571 MRYGETSAWQWRFRRQSVKLHLSSRESFTSPRGASTRRGCRRRRCGRCDLTQQRRRHGLRMASGGELIDSTWRQGLSSRHCLYSKKPLGCGKTLIAKAIANETGADFIHIKIRDGKIKVLTPREARYAVQLSNKPLLDVCPSNGHKKLAKQVYKASKIVATASTEKLQLLRELGVDLPIDYTKENFEGLPEKYNLVYDALG 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01620 201 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 147 201 - -
Gma17g01620 201 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 153 201 IPR036291 -
Gma17g01620 201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 111 IPR027417 -
Gma17g01620 201 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 147 201 IPR044626 GO:0016628
Gma17g01620 201 Pfam ATPase family associated with various cellular activities (AAA) 87 113 IPR003959 GO:0005524|GO:0016887
Gma17g01620 201 Gene3D - 73 133 IPR027417 -
Gma17g01620 201 Gene3D - 148 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01620 Gma-Chr17 18708798 18712238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01620 112 147 Sulfurtransferasese or Rhodanese AT4G24750 66.667 2.64e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01620 K18980 - gmx:100788619 95.9005