Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01600 ATGTCAGCAATTCCTATTACCTCCAGCTATGCTTCCACCTTTTCTTATTCTGCTGGTGAAGATGTAATTGTCGCTCTGACTGATATCTTGAAGCTACCTCTGATGGATAAAAGCAATGGCTGCAGCTTCTCTAGCATATCTTCAATTGTTGTCTTTTCAAGTGCTGTTTTTGTTGTCTCCTTGATTTTGGTTCGTCTCCTTTATCTCTTATACTGTAGCAGCAAGCCCTTGAGCAAAAGGGCTTCAAAACCTTTTAGTACCCTTATTATTTTAGGATCAGGTCGTCATATTGTTGAGATGCTTAATCTACTGGCAGTGTTACAGAAAGGTAGGTTTAATCCAAGATTCTACATTGCTGCTGCTACTGATAATATGAGTCTTCAAAAAGCTCAGTTGTTGGAGAATTCCCTGGCTGCTGAGTACGTTCATGATGAATCAGAAACTTTATCTGATATTGATGATGAAGAAGTTGATTTGTACATTCATGATGAGGAGGGGAAGCATATCAAGAAGATACTGTGGGAAACAGCAAATAGGGAGTATCTTGAGGAGCAGGCAGCCAAGGAAGCAGCTGCAGCAGCTAGCAAGAAAGCTTTTGAGGCAAAATTTGAAAACTGTTCGGAGGATATACTAGCGGCAAGAGAGCTTGCTGCATCTTCTACTGAAGCTGTGGCAAAATCCAAAAAGGAAATGAGACAGAAACGAGCTTATGAGGCAAAAAATACAAGGCCAGCTCAATCTGCTGCAGAGACCTTTGGCCAAATGTCTAATAAAAAAAGGGAGCAAGCAGCCAAGGAAGTAGCTGCAGCAATTAACAAGAAAGCTTTTGAGGCAAAATTTGAAAACTGTTCGGAGGATATACTAGCGGCAAGAGAGCTTGGTGCATCTTCTACTGAAGCTGTGGCAAAATCCAGAAAGGTTAGAGGTGTTCATGTTAGAGGTTATGGTGTTCATGTTTGA 960 0.4115 MSAIPITSSYASTFSYSAGEDVIVALTDILKLPLMDKSNGCSFSSISSIVVFSSAVFVVSLILVRLLYLLYCSSKPLSKRASKPFSTLIILGSGRHIVEMLNLLAVLQKGRFNPRFYIAAATDNMSLQKAQLLENSLAAEYVHDESETLSDIDDEEVDLYIHDEEGKHIKKILWETANREYLEEQAAKEAAAAASKKAFEAKFENCSEDILAARELAASSTEAVAKSKKEMRQKRAYEAKNTRPAQSAAETFGQMSNKKREQAAKEVAAAINKKAFEAKFENCSEDILAARELGASSTEAVAKSRKVRGVHVRGYGVHV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01600 319 Pfam Brf1-like TBP-binding domain 150 275 IPR011665 -
Gma17g01600 319 Gene3D Single helix bin 141 192 - -
Gma17g01600 319 PANTHER GLYCOSYL TRANSFERASE-RELATED 43 143 IPR013969 GO:0006488
Gma17g01600 319 Pfam Oligosaccharide biosynthesis protein Alg14 like 88 139 IPR013969 GO:0006488
Gma17g01600 319 MobiDBLite consensus disorder prediction 227 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01600 Gma-Chr17 18167934 18171770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01600 156 250 Inorganic Solute Cotransporters AT2G01280 44.211 4.36e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01600 K15196 - gmx:100810175 489.96