Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01591 ATGAAGAAAATGGCAGAGGATATTGACTTGAATGGAGATCCTAACAACAAGAAAGACTCAAACAACAGCGAGGCCAAAGATGAAACTGCAAAAACAGAATGGAATCTCCATGGCCTTAATGTCTTTGGAAATATGATGAATTCATTTGGAGGAACCAAAATCTCCAACGAAGTTGTTCATGAAGCTTCTAAGGTGGCACAGTTCATACAGTTGATGACAACTTTCGTCGGAGATTTTGTAATATCATTCATCAGGAGATGGCTTCTAACTCTTGTCATGCTATCTAGTATTCCACCTCTTGTTTTATGTGGTTCTATGTTAGGCCTGATTATTATGAAAACATCATCTAGGGGACAAGAAGCTTATTGTATAGCAGCAAGTGTAGTAGAGCATACAATAGGTTCTATCAGAACTGCATCTCCAAGCTTCACTGCTTTTGCTGCTGGACAAGCTGCAGCCTTTAAGATGTTTGAAACAATTAAAAGGAAGGCAGAGATTGATGCTTATGACATTACTAGTCGACAGCTTGATGACATTTGTGGAGATATAGAGGTTAGGGTGGTTTGCTTTAGTTATCCTACTAGACTTGATGAACTGATATTCAATGGATTTTCTCTTTCAATACCAAGCGGCACTACTACAACTTTGGTAGGAGAAAGTGGGAGTGGGAAATCCACAGTTGTTAGTTTGGTAGACAGATTTTATGATGGTGCAATTGTTGAAGAGAATATTGCCTATGGAAAGGATGGTGCATTTGTTGAAGAAATCAAAGATGGGGCCGAACTAGCTAATCTTTCCAAAATTATAGATAAACTTCCTCAGGTCTACCCTCAAATCTCAATTTAA 846 0.3842 MKKMAEDIDLNGDPNNKKDSNNSEAKDETAKTEWNLHGLNVFGNMMNSFGGTKISNEVVHEASKVAQFIQLMTTFVGDFVISFIRRWLLTLVMLSSIPPLVLCGSMLGLIIMKTSSRGQEAYCIAASVVEHTIGSIRTASPSFTAFAAGQAAAFKMFETIKRKAEIDAYDITSRQLDDICGDIEVRVVCFSYPTRLDELIFNGFSLSIPSGTTTTLVGESGSGKSTVVSLVDRFYDGAIVEENIAYGKDGAFVEEIKDGAELANLSKIIDKLPQVYPQISI 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01591 281 Pfam ABC transporter 202 243 IPR003439 GO:0005524
Gma17g01591 281 Pfam ABC transporter transmembrane region 63 138 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma17g01591 281 MobiDBLite consensus disorder prediction 1 30 - -
Gma17g01591 281 PANTHER - 139 236 - -
Gma17g01591 281 PANTHER - 64 138 - -
Gma17g01591 281 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 241 274 - -
Gma17g01591 281 SUPERFAMILY ABC transporter transmembrane region 64 138 IPR036640 GO:0005524|GO:0016021
Gma17g01591 281 Gene3D - 173 236 IPR027417 -
Gma17g01591 281 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 139 236 - -
Gma17g01591 281 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 64 138 - -
Gma17g01591 281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 276 IPR027417 -
Gma17g01591 281 Gene3D ABC transporter type 1, transmembrane domain 140 172 IPR036640 GO:0005524|GO:0016021
Gma17g01591 281 Gene3D ABC transporter type 1, transmembrane domain 63 139 IPR036640 GO:0005524|GO:0016021
Gma17g01591 281 PANTHER - 241 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01591 Gma-Chr17 16936910 16938793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01591 146 276 Calmodulin-binding Proteins AT2G36910 34.731 3.58e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01591 K05658 - gmx:106796643 375.17