Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01584 ATGTTCTTTGATCACATCCAGATATCTAATCTCACTTTGATCAATTCTCTATCTTTCGACATTATAATTCAAGGGCTGACCATTCTTGCTCCAATTGATTCTCCAAACACTGATGGAATAGATCTAGGAGTACCATGGACAGAAGAAGAGCACCGAACGTTCCCTGTTGGATTTGAGAAGCTAGGAAAAGGTGATTGGAGGGGTATCTCTAGAAACTATGTGACTTCAAGAACCCCAACCCAAGTCGCTAGCCATGCTCATAAGTACTTTATTCGGCTTGCAACCATGAATAAGAAAAAGAGACGTTCAAGTCTTTTTGATATGGTTGGTAACGACATCACAAATCCAATTAGCAGCTCTAACTGCAAGTCTTCCAAATGTGAAATTGAGGATGATGTGACCTTGTCACTTGTTCAATTACAAGATACTAAATTAGATGAACATAAAGATAGTGATAAATATTGTGAAGCTGGACCAGCTGGTGCTGAACATGAAGTTGTGCTTTTGTGGCTTCATCCTCAGATGAAATCTTCAAATAATAATGTTGCAGCAGTAGTTCCTGATCTGGAGCTCACTCTTGCAGTCTCCAAGGGCAAGGCTAAAACCCTTCTAGGCCTGGAACAAACACAAACAAAATCATCCCCAGATTCCTTCCTTCTTGGACCAATTAGCGTGACTTGA 681 0.4038 MFFDHIQISNLTLINSLSFDIIIQGLTILAPIDSPNTDGIDLGVPWTEEEHRTFPVGFEKLGKGDWRGISRNYVTSRTPTQVASHAHKYFIRLATMNKKKRRSSLFDMVGNDITNPISSSNCKSSKCEIEDDVTLSLVQLQDTKLDEHKDSDKYCEAGPAGAEHEVVLLWLHPQMKSSNNNVAAVVPDLELTLAVSKGKAKTLLGLEQTQTKSSPDSFLLGPISVT 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01584 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 94 IPR017930 -
Gma17g01584 226 ProSiteProfiles Myb-like domain profile. 45 90 IPR001005 -
Gma17g01584 226 PANTHER TRANSCRIPTION FACTOR KUA1 43 201 - -
Gma17g01584 226 CDD SANT 45 90 IPR001005 -
Gma17g01584 226 Pfam Myb-like DNA-binding domain 45 89 IPR001005 -
Gma17g01584 226 ProSiteProfiles SANT domain profile. 41 94 IPR017884 -
Gma17g01584 226 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 43 201 - -
Gma17g01584 226 Gene3D - 44 96 - -
Gma17g01584 226 SUPERFAMILY Pectin lyase-like 4 42 IPR011050 -
Gma17g01584 226 SUPERFAMILY Homeodomain-like 44 94 IPR009057 -
Gma17g01584 226 SMART sant 42 92 IPR001005 -
Gma17g01584 226 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 44 92 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01584 Gma-Chr17 16832517 16835253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01584 1 41 Glycoside Hydrolase AT2G23900 51.020 3.62e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma17g01584 Myb_DNA-binding 1.1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01584 - - gmx:100794742 375.17