Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01580 ATGGAAGCCGTCCAACTCATGTCCACCACAACAATCAAGGCGTCGAGTAACAATTACAACGATAACTCAGTTCAGAAAATCGATTTAACTCCGTGGGATCTCCAATTCTTCCATATTGGAAGCATCCAAAGAGGACTTCTTTTTCGCAAAGAAAAAAACACAGAATATTGTCAAATCGAGCATCTCCAACACTCACTTTCATCCACTCTCGCATTCTTTCCACTCCTCGCTGGCCGTCTTGCCATTCTCGAACATCACGACAACACTGTCTCCTCTCACATCGTATGCGACAACAAAGGTGTCCCTTTTGTCCACGCCGCTGCACACAACACCACTGTGGCCGACATCCTTCAACCCAAATACGTTCCTCCCATTCTCCGATCGTTCTTCGCACTTAACGGAGTTAAGAACTACGAAGCCACGTCACAACCAGTGCTGGCAGTGCAAGTGACAGAGCTATTTGATGGCATCTTCATTGCCCTCTCAATCAACCACGTCGTTGCAGACGGCAAGTCGTTTTGGCTTTTCGTCAATTCCTGGGCTGAAATTTCACGTGGTTCCCTCAAAATATCCAAATTCCCTTCTCTAAAACGTTGCTTTTTGGATGGCGTTGACCGCCCCATAAGGTTTCTGTTCACAAAGGAATTAGAAAAAGAACCGTCCAAAAACCTTCAACCACAAACTCGACCTGTGAGGGTCTTCCACTTCACGAAGGAAAAAATCGCGGATCTGAAATCAAAAGCTAACGCAGAGGCCAACACGGACAAAATATCTTCTCTGCAAGCGCTATTAGCTAACCTTTGGCGTTCTGTGATTCGCTGCCAACATGTTGAGCCACATGAAGAGATTCAGTTTACAATGCCCGTTGGCGTTAGACCAAGGGTAGTTCCGCCACTGCCAGAAGATTATTTCGGAAACGCAGCACTGATTGGTCGTGTTACCATGAAAGCGGGAGAACTATTACAAGGTGAGCTTGGAAAGATTGCTTTGGAGATTAACAAGATGATTTCTTCGCAATCTGATGAGAAGGTAAAGAACCACTATGAGTCTTGGGCGAGAACACCACGGCAGCGTGGCGTGGCTTATAGTAATACCTTAAACGTTGGCAGTTCCCCAAGGTTCAATATTTACGGCAATGATTTTGGGTGGGGAAAGCCCATGGCGGTTCGAAGTGGCGGTGATTTTATGTCGTATTCCATTGTTTTTTTGTTTGCTGGCTTTGAAGAAGGTTCTATTGACATTGAAGTGTTCCTTCCTTATGAGATTTTAGAGGCCATGGGAAACGACCCTGAGTTCATGCATATATGTCATTCTGAATGA 1320 0.4545 MEAVQLMSTTTIKASSNNYNDNSVQKIDLTPWDLQFFHIGSIQRGLLFRKEKNTEYCQIEHLQHSLSSTLAFFPLLAGRLAILEHHDNTVSSHIVCDNKGVPFVHAAAHNTTVADILQPKYVPPILRSFFALNGVKNYEATSQPVLAVQVTELFDGIFIALSINHVVADGKSFWLFVNSWAEISRGSLKISKFPSLKRCFLDGVDRPIRFLFTKELEKEPSKNLQPQTRPVRVFHFTKEKIADLKSKANAEANTDKISSLQALLANLWRSVIRCQHVEPHEEIQFTMPVGVRPRVVPPLPEDYFGNAALIGRVTMKAGELLQGELGKIALEINKMISSQSDEKVKNHYESWARTPRQRGVAYSNTLNVGSSPRFNIYGNDFGWGKPMAVRSGGDFMSYSIVFLFAGFEEGSIDIEVFLPYEILEAMGNDPEFMHICHSE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01580 439 Gene3D - 2 203 IPR023213 -
Gma17g01580 439 Pfam Transferase family 4 433 - -
Gma17g01580 439 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 435 - -
Gma17g01580 439 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 435 - -
Gma17g01580 439 Gene3D - 213 428 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01580 Gma-Chr17 16579204 16580965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01580 37 393 Monolignol Biosynthesis Gene Families AT5G48930 26.862 1.81e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01580 - - gmx:100794546 880.552