Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01577 ATGGCTAATGAAGAGGAACAGAAAAACCACCTCTTCGGCATCAAAGATCTCGGTCACAAGACTCTCCTTCAGAGTGATGCACTCTATCAGTATATACTTGAAACCAGTGTCTATCCAAGAGAGCACGAGTGCTTGAAAGAGATACGCAAGATGACTGCAAAACACCCACTGAACATCATGGCAACACCAGCAGACGAAGGACAACTTCTGAGCATGCTTGTTAAGCTCACGAATTCAAAGAACGCCTTGGAAATTGGTGTATTCACTGGTTACTCTCTGCTCTCCACTGCCCTGGCTCTTCCCCCTGATGGAAAGGAAAATAAAAAGGGGTCGTTGGATTTCGTTTTCGTGGATGCTGATAAGGACAATTACTTGAACTACCACAAGAGGGTACTAGAGCTTGTGAAGATTGGAGGACTGATCGGATACGATAACACCCTATGGGCTGGATCTGTGGCTGCACCACCCGATGCACCATTGATGGATTACATTAAGCCTCTTCGCGGCCATGTGATGGAGCTCAACAAGTATCTGGCTCAAGATTCGAGGATCGAGATTTGCCAGCTCCCCGTGGGTGATGGGATTACCCTGTGCCGCCGCATCATCTGA 609 0.4778 MANEEEQKNHLFGIKDLGHKTLLQSDALYQYILETSVYPREHECLKEIRKMTAKHPLNIMATPADEGQLLSMLVKLTNSKNALEIGVFTGYSLLSTALALPPDGKENKKGSLDFVFVDADKDNYLNYHKRVLELVKIGGLIGYDNTLWAGSVAAPPDAPLMDYIKPLRGHVMELNKYLAQDSRIEICQLPVGDGITLCRRII 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01577 202 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 201 IPR002935 GO:0008171
Gma17g01577 202 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 4 105 - -
Gma17g01577 202 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 106 202 - -
Gma17g01577 202 PANTHER O-METHYLTRANSFERASE-RELATED 4 105 - -
Gma17g01577 202 PANTHER O-METHYLTRANSFERASE-RELATED 106 202 - -
Gma17g01577 202 Gene3D Vaccinia Virus protein VP39 11 105 IPR029063 -
Gma17g01577 202 Pfam O-methyltransferase 34 105 IPR002935 GO:0008171
Gma17g01577 202 Pfam O-methyltransferase 106 201 IPR002935 GO:0008171
Gma17g01577 202 Gene3D Vaccinia Virus protein VP39 106 201 IPR029063 -
Gma17g01577 202 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 200 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01577 Gma-Chr17 16436332 16444725 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01577 4 201 Monolignol Biosynthesis Gene Families AT4G34050 56.198 2.69e-94 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01577 K00588 - gmx:100305498 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01905 01 54593760 54595944 Gma17g01577 17 16436332 16444725 PCT
Gma11g00499 11 4164970 4167996 Gma17g01577 17 16436332 16444725 PCT
Gma17g01577 17 16436332 16444725 Gma01g01905 01 54593760 54595944 PCT
Gma17g01577 17 16436332 16444725 Gma11g00499 11 4164970 4167996 PCT