Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01576 ATGTTGGACGCAGATAATGTCGTCGTTGGAAGAGAATGCAAGGACAACCTCCTCTGGTTCCATAACATCAAAAAGTTTGCCACCACCGATTTCTCCATGGCCGTCATCCAGGCCCACCAAGTCCTCGAGGACCAGAGCCAGATCGAGTCTGACGCCTTCGACACTGAGACTAACAATATGCTAACCATTGTTGACAATGGTATTGGCATGACCAAAGCTGATTTGGTGAGCAACTTGGGTACAATTGCTAGGTCTGGTACCAAGAAATTCATGGAAGCTTTGGCTATTGGTGCTTATGTTAGTATGATTGGATAG 315 0.4635 MLDADNVVVGRECKDNLLWFHNIKKFATTDFSMAVIQAHQVLEDQSQIESDAFDTETNNMLTIVDNGIGMTKADLVSNLGTIARSGTKKFMEALAIGAYVSMIG 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01576 104 PANTHER BNAA02G35440D PROTEIN 42 104 - -
Gma17g01576 104 Gene3D - 27 104 IPR036890 -
Gma17g01576 104 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 36 104 IPR036890 -
Gma17g01576 104 PRINTS 90kDa heat shock protein signature 60 77 IPR020575 -
Gma17g01576 104 PRINTS 90kDa heat shock protein signature 78 95 IPR020575 -
Gma17g01576 104 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 42 104 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01576 Gma-Chr17 16396721 16397530 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01576 17 55 PP2C-type Phosphatase Gene Family AT3G17090 66.667 6.71e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01576 K04079 - egt:105962096 85.5001