Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01574 ATGACCTGCACGGGGTTGATGAAGCAAGAAGAAGAAAAATTGAGAGAAAAGAAAATAGGGGTTGATGGAATGCATAAGTCAGGGAACCTCATGGCTACACCATTAGATGAAGGACAACTTTTTAGCATGCTTCTTAAGCTCATGAATGCCAATAACACTATGGAAATTGGTGTTTACACTGGTTACTCTCTTCGCTCCACTGCCCTGGCTCTTCCCCCTGATGGAAAGGAGGACAACAAGGGAGCCTTCAATTTCATTTTCGTGGACGCCGATAAGGATAATTACTTGAACTATCACAAGAGGGTGATTGATCTTGTGAAGATTAGGGGGCTGATCGGATACGATAAAACCTTATGGAATGGATCCGTGGTAGCATCAGCCGATGCGCCTATGAAGGATTACATCAAGAATTATCGTGGTCATGTGATTGAACTCAACAAGTATCCTGCTCAAGATTCTAGGATTGACATTTGTCAACTTCCAGTGGGTGATGGGATTACCTTGTGCCGCCGCATTATATAA 522 0.433 MTCTGLMKQEEEKLREKKIGVDGMHKSGNLMATPLDEGQLFSMLLKLMNANNTMEIGVYTGYSLRSTALALPPDGKEDNKGAFNFIFVDADKDNYLNYHKRVIDLVKIRGLIGYDKTLWNGSVVASADAPMKDYIKNYRGHVIELNKYPAQDSRIDICQLPVGDGITLCRRII 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01574 173 Gene3D Vaccinia Virus protein VP39 77 173 IPR029063 -
Gma17g01574 173 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 77 173 - -
Gma17g01574 173 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 8 76 - -
Gma17g01574 173 Pfam O-methyltransferase 77 172 IPR002935 GO:0008171
Gma17g01574 173 Pfam O-methyltransferase 23 76 IPR002935 GO:0008171
Gma17g01574 173 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 172 IPR002935 GO:0008171
Gma17g01574 173 PANTHER O-METHYLTRANSFERASE-RELATED 8 76 - -
Gma17g01574 173 PANTHER O-METHYLTRANSFERASE-RELATED 77 173 - -
Gma17g01574 173 Gene3D Vaccinia Virus protein VP39 3 76 IPR029063 -
Gma17g01574 173 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 171 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01574 Gma-Chr17 16387080 16389034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01574 4 172 Monolignol Biosynthesis Gene Families AT4G34050 51.643 1.17e-66 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01574 K00588 - gmx:100795858 216.853