Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma17g01571 | ATGATTAATTGTAATGGAGTTTTCGGATTGGTGATCGAAGGTGTTCCTTGGACGGAGGAAGAGCATAGGTTATTCCTGTTAGGGTTACACAAAGTTGGAAAAGGAGATTGGAGAGGAATTTCTCGAAACTTCGTGAAAACTCGCACGCCAACTCAGGTCGCTAGTCACGCTCAGAAGTACTTCCTCCGTCGCCACAACCAGAACCGTCGTCGTCGGAGATCTAGCCTCTTCGACATCACCATAGGTAAAGAGGGAGAGAGGAGGGAGGGGGGAGGGAAGAACAATGACCGGGATGATATCGATCGCAAGGTTTGCCACAAAGGGTGCAATGAGACTCAGTTGGATACAATGAAAGCGATCACAAAGGAGTCATCGTGGACATGCAAGCCAAAGGGAGCGGCGTCGAGGACACAATTAAAATCGAAGCTAAGGACTCCTTCGGAATCCTTCATTGGGACTCCCCCTCTCGCTACTCCGTCATCATCATATAGGTTCTAG | 498 | 0.49 | MINCNGVFGLVIEGVPWTEEEHRLFLLGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITIGKEGERREGGGKNNDRDDIDRKVCHKGCNETQLDTMKAITKESSWTCKPKGAASRTQLKSKLRTPSESFIGTPPLATPSSSYRF | 165 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma17g01571 | 165 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 13 | 86 | - | - | |
Gma17g01571 | 165 | SUPERFAMILY | Homeodomain-like | 15 | 64 | IPR009057 | - | |
Gma17g01571 | 165 | CDD | SANT | 16 | 61 | IPR001005 | - | |
Gma17g01571 | 165 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 16 | 65 | IPR017930 | - | |
Gma17g01571 | 165 | ProSiteProfiles | Myb-like domain profile. | 16 | 61 | IPR001005 | - | |
Gma17g01571 | 165 | MobiDBLite | consensus disorder prediction | 72 | 101 | - | - | |
Gma17g01571 | 165 | PANTHER | TRANSCRIPTION FACTOR MYB1R1-LIKE | 13 | 86 | - | - | |
Gma17g01571 | 165 | MobiDBLite | consensus disorder prediction | 67 | 101 | - | - | |
Gma17g01571 | 165 | MobiDBLite | consensus disorder prediction | 131 | 165 | - | - | |
Gma17g01571 | 165 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 14 | 63 | IPR006447 | GO:0003677 | |
Gma17g01571 | 165 | Gene3D | - | 15 | 66 | - | - | |
Gma17g01571 | 165 | Pfam | Myb-like DNA-binding domain | 16 | 61 | IPR001005 | - | |
Gma17g01571 | 165 | ProSiteProfiles | SANT domain profile. | 12 | 65 | IPR017884 | - | |
Gma17g01571 | 165 | SMART | sant | 13 | 63 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma17g01571 | Gma-Chr17 | 16320310 | 16323622 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Gma17g01571 | Myb_DNA-binding | 1.3e-11 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma17g01571 | - | - | gmx:778178 | 125.561 |