Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01570 ATGGTTAAGCCGAAGCAACAGAAGAAGCTATACCAGAAGAAGCAACCACACCCACAAATTAAGAAGCAGGGAAAACAAGTAGGTACTTCTCAATTTCGGACTCAGTTGGATGGTCTGGGCTTACGCATTGTTGAAGTGACTGCAGATGGTAATTGTTTCTTCAGAGCTGTTGCTGATCAGTTGGAAGGCAATGAGGAGGAACATGGAAAGTACCGCAGCATGGTGGTGAAACACATATTGGATAACCGGGAGATGTTTGAACCCTTTATCGAAGATGAAGTCCCATTTGATGAATATTGCCAGTCTATGGAAAATGATGGTACGTGGGCTGGACATATGGAATTGCAGGCAGCTTCTCTTGTAACGCGTAGTAATATATGCATTCATCGGAACATGTCCCCTCGTTGGTACATAAGAAATTTTGATAATCgTGGAGTTCGTATGATCCATCTGTCTTATCATGATGGGGAGCATTATAACAGTGTGCGGTTAAAGGATGATCCTTGTGATGGAGCTGCAAGGCCAATTGTAATTGAGGCTGATGCTGATCTTTCAGTACCATCACATCAAACAAAAGTTGTGGGCAACAAATTCCATGGGCGAGCTGGTTGGGAAGCCTTTCAACCAGGGTCCATAAAGTTGGTTATGGCAGGAACTGGATGTGAAAATGCCGAAAAAGTGGAACAGATTCTAGAGCAAGTAAATGGAGATGTTGACGCTGCAATAGAGTTTCTAATAGCAGAACAAGGAACAGAAGAATGCTCTGCAAACTCTGATTCCCTTCCAAATCAGGCTAATACTTGCGCATGTGCAGGTCATGATGAAAATGAGAATCATAAGCAGCACAAAGAAGACATGGTAGAGGAAAGCACTAATGATGAATCAAATAATAGCTCCAAGAAGACCAATACTTATACCACATTGCAACCAAATGACAAGATTCCTAGAAACAAGGTCTGCCCGTGTGGTTCCCAAAAGAAATACAAAGCTTGTTGTGGATCTGCTTTGGGGAAACAATCGGCTAAGTTTGTAGTTCACCAAGCAGCTGACTCAAAAAAGGGCAAAAAAGAAAGGAAGCAAGGAAAAAAGGGGATTTCTGCAAAAGCTGAAGTACCTAGTGAATATGACTTGGTAACACCTGACATGGGTGCACTTTGTATTTGA 1164 0.4227 MVKPKQQKKLYQKKQPHPQIKKQGKQVGTSQFRTQLDGLGLRIVEVTADGNCFFRAVADQLEGNEEEHGKYRSMVVKHILDNREMFEPFIEDEVPFDEYCQSMENDGTWAGHMELQAASLVTRSNICIHRNMSPRWYIRNFDNRGVRMIHLSYHDGEHYNSVRLKDDPCDGAARPIVIEADADLSVPSHQTKVVGNKFHGRAGWEAFQPGSIKLVMAGTGCENAEKVEQILEQVNGDVDAAIEFLIAEQGTEECSANSDSLPNQANTCACAGHDENENHKQHKEDMVEESTNDESNNSSKKTNTYTTLQPNDKIPRNKVCPCGSQKKYKACCGSALGKQSAKFVVHQAADSKKGKKERKQGKKGISAKAEVPSEYDLVTPDMGALCI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01570 387 MobiDBLite consensus disorder prediction 277 310 - -
Gma17g01570 387 MobiDBLite consensus disorder prediction 1 20 - -
Gma17g01570 387 MobiDBLite consensus disorder prediction 292 310 - -
Gma17g01570 387 Gene3D - 211 336 - -
Gma17g01570 387 ProSiteProfiles OTU domain profile. 41 165 IPR003323 -
Gma17g01570 387 PANTHER OTU DOMAIN CONTAINING PROTEIN 8 313 - -
Gma17g01570 387 SUPERFAMILY Cysteine proteinases 23 163 IPR038765 -
Gma17g01570 387 Gene3D - 27 165 - -
Gma17g01570 387 Pfam SEC-C motif 316 333 IPR004027 -
Gma17g01570 387 CDD CUE 225 245 - -
Gma17g01570 387 SUPERFAMILY Sec-C motif 313 334 - -
Gma17g01570 387 PANTHER OTU DOMAIN-CONTAINING PROTEIN 3 8 313 - -
Gma17g01570 387 Pfam OTU-like cysteine protease 48 136 IPR003323 -
Gma17g01570 387 MobiDBLite consensus disorder prediction 347 370 - -
Gma17g01570 387 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01570 Gma-Chr17 16300266 16319105 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01570 36 196 C2H2 Transcription Factor Family AT1G50670 23.494 6.06e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01570 K13717 - gmx:100788938 744.962