Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01559 ATGCATCTGGATCAACATGACCCCAAAACGACAACAAGAGCAACAAAAGTCCTCCCTCTGTTCCTCTACTTGTTCTTCTTCTTCAGCCTCGCCTCTTCGGCTCCTCCCATGCTCCCCTCCGACGCAGTATCGTTAGTGTCGTTTAAGCGTGAAGCGGACCAAGACAACAAGCTCCTCTACTCCCTCAACGAAAGCTACGACTACTGCCAGTGGCAGGGCGTGAAGTGCGCGCAGGGCAGAGTGGTCCGCTTTGTGGCCCAGTCCATGGGCCTGCGCGGCCCATTCCCACCGCACAGCCTCACGAGCCTGGACCAGCTCCGAGTCCTCAGCCTCCGCAACAACTCCCTCTTCGGGCCCATCCCCGATCTAAGCCCACTCGTGAACCTCAAGTCACTCTTCCTCGACCACAACAACTTCTCTGGCTCCTTCCCTCCCTCCCTTATCTTCCTCCACCGCCTCCTCACTCTCTCCCTCTCCCACAACCGCCTCTCCGGTCCCCTCCCCGTAAACCTCACCCTCCTCGACCGCCTCATCGCGCTTCGTCTCAACTCCAACCACTTCTCCGGCACGCTTCCTTTCTTCAACCAGACCACCTTAAAAGTCCTCGACCTATCCTACAACAATCTCTCCGGCCCTGTGCCGGTCACCCCGACTCTAGCCAAGTTCAACGCAACAACATCCTTTTCAGGTAACCCCGGTCTCTGCGGGGAGATTGTTCACAAAGAGTGCGACCCTCGTTCACACTTCTTCGGCCCCGCCACGTCATCCTCTACCACACCCTTGAGCCAGAGTGAACAATCTCAGGGTATTGTAGTTGTTCCTTCTTCTACGACCACAACAAAGCATGATAAAAAAACAGGACTTGTTGTCGGGTTTGTCGTCGCGGTTGTTCTTGTCGCTGCTTTCACTCTCACGATGGTTTCTTTGGTGAGAAAGAAGCAAAATGGTAAAGCTTTTAGAGCAAAAGGCGTGGTTTTGGAGAGTCCTGAGGTGGAGGGTGGTGGTGGTGTCGTTGTGGTGGAAGGTGAGAGGGAGGTGAAGATGAGAAAGATGGAAGAGGCGCACAGGAGCGGGAAGCTGGTGTTCTGCTGCGGGGAGGTGCAGAGTTACACGCTGGAGATGCTGATGAGGGCTTCGGCGGAGTTGTTAGGGAGGGGGAGTGTGGGGACCACCTACAAGGCGGTGATGGATTCGCGGCTGATTGTGACGGTGAAGAGGTTGGATGGGAAAAGTGCGGCGGCGGGGAGTGATGGGGAAGGGTTTGAGAGGCACATGGAGGTTGTGGGGAGGCTGAGACACCCCAATTTGGTGCCTTTGAGGGCTTATTTTCAGGCCAAGGGTGAGAGGCTTGTTATTTATGATTATCAGCCCAATGGCAGCCTCTTCAATCTCGTTCATGGTTCAAGATCAGCGAGGGCAAAACCATTGCATTGGACATCATGTTTGAAAATAGCAGAAGATGTAGCACATGGACTTGCTTACATCCATCAAGTTTCATCCTTAATCCATGGCAACCTAAAATCCTCTAACGTCCTTCTTGGGATGGACTTTGAGGCTTGCATCACGGACTATTGCTTGGCCTTGTTTGCAGATTCTTCATTCTCCGAAGACCCTGATTCCGCCGCCTACAAAGCACCGGAGGCTCGCAACTCTAGCCGCAGGGCCACTGCTAAGTCTGATGTGTATGCTTTTGGGGTGCTTCTAATAGAGCTTTTGACGGGTAAACACCCTTCCCAGCACCCTTTTCTTGCACCAGCGGACTTGCAAGATTGGGTTAGAGCGATGAGGGATGACGATGGCAGCGAAGACAACCGGCTGGAGATGCTCACGGAGGTTGCCAGTATTTGCAGCGCAACATCGCCAGAGCAGAGGCCGGCGATGTGGCAAGTCCTTAAGATGATACAGGGAATTAAGGACAGTGTTACCATGGAGGATACTGCACTTACTGGACTCTCATAG 1959 0.5375 MHLDQHDPKTTTRATKVLPLFLYLFFFFSLASSAPPMLPSDAVSLVSFKREADQDNKLLYSLNESYDYCQWQGVKCAQGRVVRFVAQSMGLRGPFPPHSLTSLDQLRVLSLRNNSLFGPIPDLSPLVNLKSLFLDHNNFSGSFPPSLIFLHRLLTLSLSHNRLSGPLPVNLTLLDRLIALRLNSNHFSGTLPFFNQTTLKVLDLSYNNLSGPVPVTPTLAKFNATTSFSGNPGLCGEIVHKECDPRSHFFGPATSSSTTPLSQSEQSQGIVVVPSSTTTTKHDKKTGLVVGFVVAVVLVAAFTLTMVSLVRKKQNGKAFRAKGVVLESPEVEGGGGVVVVEGEREVKMRKMEEAHRSGKLVFCCGEVQSYTLEMLMRASAELLGRGSVGTTYKAVMDSRLIVTVKRLDGKSAAAGSDGEGFERHMEVVGRLRHPNLVPLRAYFQAKGERLVIYDYQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQVSSLIHGNLKSSNVLLGMDFEACITDYCLALFADSSFSEDPDSAAYKAPEARNSSRRATAKSDVYAFGVLLIELLTGKHPSQHPFLAPADLQDWVRAMRDDDGSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQGIKDSVTMEDTALTGLS 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01559 652 SUPERFAMILY Protein kinase-like (PK-like) 381 640 IPR011009 -
Gma17g01559 652 Pfam Protein kinase domain 380 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01559 652 Gene3D Transferase(Phosphotransferase) domain 1 457 649 - -
Gma17g01559 652 Gene3D Ribonuclease Inhibitor 194 247 IPR032675 -
Gma17g01559 652 Gene3D Phosphorylase Kinase; domain 1 343 455 - -
Gma17g01559 652 Gene3D Ribonuclease Inhibitor 39 193 IPR032675 -
Gma17g01559 652 PANTHER LRR RECEPTOR-LIKE KINASE 6 648 - -
Gma17g01559 652 SUPERFAMILY L domain-like 38 235 - -
Gma17g01559 652 ProSiteProfiles Protein kinase domain profile. 377 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g01559 652 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01559 Gma-Chr17 15950830 15954676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01559 38 645 Receptor kinase-like Gene Family AT3G50230 53.249 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma17g01559 Pkinase 1.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01559 - - gmx:100783086 1200.65